Pairwise Alignments

Query, 1420 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1353 a.a., two-component system sensor histidine kinase/response (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  572 bits (1473), Expect = e-166
 Identities = 417/1477 (28%), Positives = 705/1477 (47%), Gaps = 196/1477 (13%)

Query: 9    LIIYSICSLAGQVRAQERFADRYNITYVTMNEGLPHNFIDDLYKDSRGFMWISTAGGGLS 68
            ++IY      G   A     ++   +Y+++NEGL  + +  + +D RG MW +T  G ++
Sbjct: 7    IVIYLFFLCLGMHSAFSETPEQITFSYISINEGLSQSTVFSIDQDKRGNMWFATYDG-VN 65

Query: 69   RYDGYEFVNYTPNNHQCKLKSNFIRNVCE----------------------DAFQRLWIV 106
            +YDGY F  Y  N       +N I  + +                      D FQ  +  
Sbjct: 66   KYDGYAFTVYQHNEDDPNSIANDISRIVKTDSQGRVWIGTRDGLSRYDEEKDIFQNFFYE 125

Query: 107  SEGGTDIIDLSTLKPIIPHD-----PKGILPKILELPATRIMKDTQGCIWLHCDNALHRI 161
              G    + ++ ++ I P       P+G++  + ++  ++ + D+          A+H+ 
Sbjct: 126  KNGKH--LQVNGIEEISPEQLLISTPEGLI--MFDIKESKFIDDS-------FSTAMHKT 174

Query: 162  EFNDKGEVQILSTLSPVYLNGPDIALKDIDEDGKIWMGNNGEIRKVALSPQKRLVTTPIA 221
                     I STL   Y  G  I +    +    +        KV           PI 
Sbjct: 175  ---------IASTL---YRQGDQIYIGTSTDGLYTYSITQKTFEKVI----------PIL 212

Query: 222  DCLKFEAGTYISDFLSKENEVWISSD-RGLFRYNKTGNVIKRYEHDSGNPYSLSQNYLTN 280
               + +A    S        +W++++  GLF  N     IK Y H   NP S+S NY+ +
Sbjct: 213  GTKQIQAILQQSP-----TRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRS 267

Query: 281  LAITDDKQLIVATLRGINIYNPMTDNFERIACDLPNGGTNLLNSNFINCILTDGEH-IWF 339
            LA+    +L + T   +NIY+  TD+F   + +    G+  L+   +  I  D +  +W 
Sbjct: 268  LAMDSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGS--LSQRSVRSIFMDSQGGMWL 325

Query: 340  GTETGGINLLNPRQLSIRSYRHDKENPSSLSYNPVNAIYEDVYGTLWVGTVEGGLNRKER 399
            GT  GG+N  +P +   ++ R+     +SLS N V+ I ED    LW+GT +GGLN    
Sbjct: 326  GTYFGGLNYYHPIRNRFKNIRNIPYK-NSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNP 384

Query: 400  NSEDFTHYTREHG----GLSHNSVSALTADTDNHL-WIGTWGGGLNLLDLKAPRQILEVI 454
             ++ FT YT +      G+  N++ A+  D    L +IGT  GGL++L   + +  +E  
Sbjct: 385  ITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ--VENF 442

Query: 455  SSQTGGGFPINFIGVLNYDPINEG-IWIGANQGLYFYDPVKKEITAPLPDKAAENIHGCI 513
            + +       N   +L   P  EG +W+G    L  ++P ++  T    +K    +    
Sbjct: 443  NQRNSQLVNENVYAIL---PDGEGNLWLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQ 499

Query: 514  GSII--DKEGKLWVGCLEGVYIIDLHSRSSKGEFQYRHLNYKLDD--PSSRLIEKIT-CF 568
             + +  D   +LW+G  EG+ +           F+   L+ +     P S + +  T C 
Sbjct: 500  ITTLFRDSHKRLWIGGEEGLSV-----------FKQEGLDIQKASILPVSNVTKLFTNCI 548

Query: 569  YQGKDGTLWLGSN-GYGIYQRKIDAQGKEQFISYSTAQGLPNNSVRGILEDNNGNLWIST 627
            Y+  +G +W+G+  G+  +  K      +Q   Y+T  GLPNN V GILED+ G LW+ST
Sbjct: 549  YEASNGIIWVGTREGFYCFNEK-----DKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST 603

Query: 628  NNGLSCYHQAENRFINYTIQDGLIDTQFYWNASCGSSHDLLYFGSVGGLVAIESNRPAMS 687
            N G+SC++    +F N+T  DGL   QF   + C +S   +YFG + G+      RP + 
Sbjct: 604  NRGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGINGITTF---RPELL 660

Query: 688  LP---AAKVRFTRLRIGNEEILPGSE--YLSEDIAITTELKLHEKEKSFSLEFAALNFES 742
            L       V  T+L++ N+ + P  E   L+++I+ T  + L   + +FS+EF   N+ S
Sbjct: 661  LDNPYTPPVVITKLQLFNKVVRPDDETGILTKNISETKSITLKSWQTAFSIEFVVSNYIS 720

Query: 743  NNTAIYSYRLVGFDDKWVQVPGNRRFASYTNLPPGSYTLQVRYTPDGENEGENITELKIT 802
                 ++Y+L G+D +W  +  +R   SY+NLP G+Y   V+            T L+I 
Sbjct: 721  GQHNTFAYKLEGYDKEWYYLTDSRT-VSYSNLPQGTYQFLVKAANSDGKWNPIPTALEII 779

Query: 803  IVPYFYKTVWFILFIIVLLS---VSVWQFYQWRIRNLKRQKEYLHRTVEERTHELEQQKH 859
            ++P +YKT W +L      +     V++F+ W  ++++ Q E     +E R  E +++  
Sbjct: 780  VLPIWYKTWWALLIFFATFAGFITFVFRFF-WMRKSMEAQLE-----IERRDKEHQEEI- 832

Query: 860  LLENQTDELSRQNQMLIQQNEKITRQKAQLIRMSRKVQELTLDKISFFTNITHEFRTPIT 919
                        NQM                            K+ FF NI+HE RTP+T
Sbjct: 833  ------------NQM----------------------------KMRFFINISHELRTPLT 852

Query: 920  LIIGPIERALKLSYNPQVIEQLNFVERNSKYLLSLVNQLMDFRKVESGKLEIVKTRGNFL 979
            LI+ P++  +    +     QL +++RN+  LL LVNQLMD+R+ E G  E+   +GN  
Sbjct: 853  LILTPLQEIINKISDRWTRNQLEYIQRNANRLLHLVNQLMDYRRAELGVFELKAKKGNAH 912

Query: 980  KFIDSLITPFEVFAQERNIVLKRYYRMEMPEILYDEEAMRKVVTNLLSNAIKFTPNGGTV 1039
            + I      ++  A+ + I    +  +E  E+L+D   +  +V NLLSNA K+T +G ++
Sbjct: 913  QLIQDNFLFYDKLARHKKITYTLHSELEDKEVLFDANYLELIVNNLLSNAFKYTESGQSI 972

Query: 1040 SLYLSALFAKDSEKETLYICVKDSGSGIPEEDLNRIFNRFYQSQNQVKYPVYGQAGTGIG 1099
            ++ L        E   L + V D+G GIP     +IF RFYQ +++         G+GIG
Sbjct: 973  TVTLK------EENGWLLLQVSDTGIGIPINKQGKIFERFYQIESE-------HVGSGIG 1019

Query: 1100 LYLCKRIVQMHGGEIKAFNNRHAGCSFRILLP----------LQRNERKDEKTIIIDHND 1149
            L L +R++++H G I+  +  + G +F + LP          L  N  ++E+  +   N 
Sbjct: 1020 LSLVQRLIELHHGRIELDSEENKGSTFSVYLPQDLSVYKPSELASNNEQNEEEQVYSTNS 1079

Query: 1150 SSATPVQ------DSGSPKEKEALSILVVEDNADMRGYIRSILREQYHVLEAANGEEALH 1203
             +   +       +S    +K+  +IL+VEDN ++R Y+ + L + ++ LEA NGEEAL 
Sbjct: 1080 KAMYFIDTEKVENESVESGDKKRGTILIVEDNNEIRRYLSNGLADLFNTLEAGNGEEALE 1139

Query: 1204 ILNSNPIDFIISDLMMPVMDGIELSRRVKETFAISHIPFLMLTAKTSQEARLESYRMGVD 1263
             L  N +D I++D+MMPVMDGI+L + VK+     HIP ++L+AKT  + ++E  +MG D
Sbjct: 1140 KLKDNEVDVIVTDVMMPVMDGIKLCKNVKQNIRTCHIPVIILSAKTDIKDQMEGLQMGAD 1199

Query: 1264 EYLLKPFDETLLLARIQNILENRKRYQRKFTLDMDVDVLNMEEESGDKKFLNQVMEVIKE 1323
            +Y+ KPF   +L  +IQN++  R+R   K+   ++V+   +   + D+  L + M ++++
Sbjct: 1200 DYIPKPFSLAILTTKIQNMMRTRRRMLDKYAKSLEVEPEKITFNAMDEALLKRAMAIVEK 1259

Query: 1324 NYKNSYFEVSDFCEAVGVSKSLLNKKLQNLIGQSAGQFIRNYRLNIARELILKNRETKNM 1383
            N  N  F   +F   + +S+S L+ KL+ + G+S   FIR  R N A +L+   R T   
Sbjct: 1260 NMDNIEFSTDEFAREMNMSRSNLHLKLKAITGESTIDFIRKIRFNEAAKLLKDGRYT--- 1316

Query: 1384 NIAEVAYEVGFNDPKYFTRCFTKHFNVTPSALLNNEE 1420
             +AEV+  VGFN P YF   F K+F   P+  +   +
Sbjct: 1317 -VAEVSTMVGFNTPSYFATSFKKYFGCLPTEYIKKSK 1352