Pairwise Alignments

Query, 1420 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1326 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  492 bits (1266), Expect = e-142
 Identities = 398/1423 (27%), Positives = 653/1423 (45%), Gaps = 170/1423 (11%)

Query: 31   YNITYVTMNEGLPHNFIDDLYKDSRGFMWISTAGGGLSRYDGYEFVNYTPNNHQCKLKSN 90
            Y    + +N GL  N +  + +D +GFMW  T  G L RYDG  F  +   +    L +N
Sbjct: 28   YAFRSLDINNGLSQNTVHAILQDKQGFMWFGTKDG-LDRYDGISFRAFMKESGT--LGNN 84

Query: 91   FIRNVCEDAFQRLWIVSEGGTDII--DLSTLKPIIPHDPKGILPKILELPATRIMKDTQG 148
            FI ++ ED   ++WI ++ G  +   +  T++  I    K  L   ++     +  D  G
Sbjct: 85   FITSLYEDQQGQIWIGTDVGLYVYSPEHETVERFIM---KSDLDTGIDYTVNLVTGDKDG 141

Query: 149  CIWLHCD-----------NALHRIEFNDKGEVQILSTLSPVYLNGPDIALKDIDEDGKIW 197
             IW+              N L     +  G ++   +L  +Y +  ++   DI  DG ++
Sbjct: 142  GIWVVTQSQAVFYYNPQTNKLINYLSDQSGRLKF-GSLGQLYFDSDNVCWLDI-RDGNLY 199

Query: 198  MGNNGEIRKVALSPQKRLVTTPIADCLKFEAGTYISDFL-SKENEVWISSDRGLFRYNKT 256
               +     V + P+         D  +   G YI   L    N +++ +  GL   N T
Sbjct: 200  FSKDKLQTLVPVFPK---------DGNEPFKGEYICKLLPGPYNCMYVGTITGLKEVNLT 250

Query: 257  GNVIKRY--EHDSGNPYSLSQNYLTNLAITDDKQLIVATLRGINIYNPMTDNFERIACDL 314
               ++    + +SG+       Y+  +A   D +L   T  G+ IYN  T   + +    
Sbjct: 251  NKTVRTLLSKDESGDDI-----YVREIAFYSDDELWAGTESGLYIYNLRTK--KTVHLRN 303

Query: 315  PNGGTNLLNSNFINCILTDGEH-IWFGTETGGINLLNPRQLSIRSYRHDKENPSSLSYNP 373
             +G    ++ N I  I  D E  IW G+  GG+N   P+Q +     + +     +    
Sbjct: 304  VSGDPYSISDNAIYSICKDREGGIWIGSYFGGVNYY-PKQYTYFDKVYPRTEIDEMGKR- 361

Query: 374  VNAIYEDVYGTLWVGTVEGGLNRKERNSEDFTHYTREHGGLSHNSVSALTADTDNHLWIG 433
            V     D  GTLW+GT + GL     ++     +   H  + HN V  L  D  N+LW+G
Sbjct: 362  VREFCADHDGTLWIGTEDKGLFHYYPSTGLIEPF--RHPDIYHN-VHGLCLD-GNYLWVG 417

Query: 434  TWGGGLNLLDLK---------APRQILEVISSQTGGGFPINFIGVLNYDPINEGIWIGAN 484
             +  GLN +DL+         AP  I  +  + +G                   +W+G  
Sbjct: 418  HFAKGLNRIDLRTHAVKHYFDAPNDIFSICRTTSGN------------------LWLGTT 459

Query: 485  QGLYFYDPVKKEITAPLPDKAAENIHGCIGSIIDKEGKLWVGC-LEGVYIIDLHSRSSKG 543
             GL+ Y          +P+     I+       DK+G LW+   ++GVY  ++ +    G
Sbjct: 460  AGLFRYHSETNRFER-VPELGWVFIYNIKE---DKQGNLWLATYIDGVYKRNVRT----G 511

Query: 544  EFQYRHLNYKLDDPSSRLIEKITCFYQGKDGTLWLGSNGYGIYQRKIDAQGKEQFISYST 603
            E++  H  +   +PSS    K+   ++     LW  + G G    + D  GK  F+ Y +
Sbjct: 512  EWE--HYMHDETNPSSLPSNKVLSIFEDSQNQLWFTTQGGGFC--RFDPSGKI-FVRYDS 566

Query: 604  AQGLPNNSVRGILEDNNGNLWISTNNGLSCYHQAENRFINYTIQDGLIDTQFYWNASCGS 663
            + GLP+N V  I ED  G  WI+TN GL  ++     F  YTI +GL+  QF + +S   
Sbjct: 567  SIGLPSNVVHRIEEDEKGLFWITTNKGLVHFNPKTLEFKVYTIANGLLSNQFNYQSSYKD 626

Query: 664  SHDLLYFGSVGGLVAIESNRPAMSLPAAKVRFTRLRIGNEEILPGS--EYLSEDIAITTE 721
             +  +YFGS+ G ++ E +    +     V  T   + N+++  GS    L + I ++  
Sbjct: 627  KNGRIYFGSINGFISFEPSVFVDNDFLPPVVITDFMLFNKKVPVGSTDSPLKQSITLSDY 686

Query: 722  LKLHEKEKSFSLEFAALNFESNNTAIYSYRLVGFDDKWVQVPGNRRFASYTNLPPGSYTL 781
            L+L   + SFS   AAL+++S +     Y+L G+D +W  V  N    +Y+NLP G+Y L
Sbjct: 687  LELQSNQNSFSFSVAALSYQSPDMNTVLYKLEGYDSEWYSVGKN--LITYSNLPYGTYVL 744

Query: 782  QVRYTPDGENEGENITELKITIVPYFYKTVW-FILFIIVLLSVSVWQFYQWRIRNLKRQK 840
            +V+          ++  LKI I+P FY +VW +I+++I++L      F+ +R    KR  
Sbjct: 745  KVKAANSDGIWNPDVRTLKIRILPPFYLSVWAYIIYVILILGALFATFFYFR----KRAV 800

Query: 841  EYLHRTVEERTHELEQQKHLLENQTDELSRQNQMLIQQNEKITRQKAQLIRMSRKVQELT 900
            E   R +E+     EQ+K                                      +EL 
Sbjct: 801  EKHQRAMEK----FEQEKE-------------------------------------RELY 819

Query: 901  LDKISFFTNITHEFRTPITLIIGPIERALKLSYNPQVIE-QLNFVERNSKYLLSLVNQLM 959
              KI FFTN+ HE RTP+TLI  P+E  L     P+ ++ +L  +++N++ LL+L NQL+
Sbjct: 820  TSKIEFFTNVAHEIRTPLTLIKSPLESVLTEKELPENVKMELEIMDQNAERLLNLTNQLL 879

Query: 960  DFRKVESGKLEIVKTRGNFLKFIDSLITPFEVFAQERNIVLKRYYRMEMPE----ILYDE 1015
            DFRK E+   ++     +    I S+   F     ++ I LK    +E+PE       D+
Sbjct: 880  DFRKTENKGFKLNPVECSVGSIIRSVYKRFTTLVNQKGIELK----VEIPEEELLASVDK 935

Query: 1016 EAMRKVVTNLLSNAIKFTPNGGTVSLYLSALFAKDSEKETLYICVKDSGSGIPEEDLNRI 1075
            EA+ K+++NL +NA+K+      +SL +      D   +   I + + G  IP E    I
Sbjct: 936  EALTKILSNLFTNALKYAQTYAYLSLSV------DEAGKEFTIVMSNDGKIIPIEMRENI 989

Query: 1076 FNRFYQSQNQVKYPVYGQAGTGIGLYLCKRIVQMHGGEIKAFNNRHAGCSFRILLPLQRN 1135
            F  F Q ++          GTGIGL L + + ++H G +    +      F + +P++  
Sbjct: 990  FRPFVQYRDGKDIV----PGTGIGLALARSLAELHQGTLTMDQDMECN-RFILSIPIRHQ 1044

Query: 1136 ------ERKDEKTIIIDHNDSSATPVQDSGSPKEKEALSILVVEDNADMRGYIRSILREQ 1189
                  E +  +  + D  D+  T +  S   K KE  S+L+VEDN DM  ++   L   
Sbjct: 1045 TASDVLEEEHREKPVYDEEDNE-TRIMPSDKDK-KEVASVLIVEDNKDMLAFVARQLSPL 1102

Query: 1190 YHVLEAANGEEALHILNSNPIDFIISDLMMPVMDGIELSRRVKETFAISHIPFLMLTAKT 1249
            YHV+ A NG EAL +L    I+ +ISD+MMP MDG+EL   +K     SHIP ++LTAKT
Sbjct: 1103 YHVITAENGIEALKVLEHEYINLVISDIMMPEMDGLELCEHLKSNLDYSHIPIILLTAKT 1162

Query: 1250 SQEARLESYRMGVDEYLLKPFDETLLLARIQNILENRKRYQRKFTLDMDVDVLNMEEESG 1309
            + E+++E    G D Y+ KPF    L   + N+L NR+R +R+F     +    M +   
Sbjct: 1163 TLESKIEGLEQGADAYIEKPFSVEYLRVNVANLLSNRERLRRRFIESPFIKADTMAQTKA 1222

Query: 1310 DKKFLNQVMEVIKENYKNSYFEVSDFCEAVGVSKSLLNKKLQNLIGQSAGQFIRNYRLNI 1369
            D+ F+ ++ E + ++  N+   + D  EA+ + +S   +KL+ ++  S  +++R  RL  
Sbjct: 1223 DEVFIQKLNEYVSQHLDNTDLVIDDMAEAMNMGRSNFYRKLKGVLDMSPNEYLRLIRLKK 1282

Query: 1370 ARELILKNRETKNMNIAEVAYEVGFNDPKYFTRCFTKHFNVTP 1412
            A +L+   R      I E++Y VGFN P YF+ CF K F V P
Sbjct: 1283 AAQLLKDGR----YGIVEISYMVGFNSPSYFSNCFKKQFGVLP 1321