Pairwise Alignments

Query, 1420 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1337 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  435 bits (1118), Expect = e-125
 Identities = 356/1364 (26%), Positives = 605/1364 (44%), Gaps = 183/1364 (13%)

Query: 142  IMKDTQGCIWLHCDNALHRIEFNDKGEVQILSTLSPVYLNGPDIALKDIDEDGKIWMGNN 201
            I++D+ G +W    N L+R  F+    +++      +     +I+    D +  +W+G +
Sbjct: 46   IIQDSYGFMWFGTKNGLNR--FDGTSILRMNCEDHQLKKGNNNISALYEDANRTLWVGTD 103

Query: 202  GEIRKVALSPQKRLVTTPIADCLKFEAGTYISDFLSK-----ENEVW-ISSDRGLFRYNK 255
               R V L      V T I    K + G  + +++S      +  +W I  D+G+FRY  
Sbjct: 104  ---RGVYLYHPASDVFTHINQ--KTKEGKTMDNWVSAIVGDTQGNIWVIIPDQGIFRYKD 158

Query: 256  TGNVIKRYEHDSGNPYSLSQNYLTNLAITDDKQLIVATLR-GINIYNPMTDNFERIACDL 314
                 + Y ++  N     Q     + + ++ ++ +     GI  YNP  D+FE+I  D 
Sbjct: 159  N----ELYFYEISNRRQFKQESPNCICVRENGEVWIGFWGLGICRYNPQNDSFEQIVED- 213

Query: 315  PNGGTNLLNSNFINCILTDGE--------------------------------------- 335
               G  L+  N IN I   G+                                       
Sbjct: 214  -RDGRPLVGKN-INSICEYGDWLIMAANEGELIKYNTKSHVLEDIKVAGADNTFYTTVAY 271

Query: 336  ---HIWFGTETGGINLLNPRQLSIRSYRHDKENPSSLSYNPVNAIYEDVYGTLWVGTVEG 392
                IW GT   G+ +++ ++  + S + D     SLS   + ++ +D  G +W+GT+ G
Sbjct: 272  MKGKIWLGT-FNGLYVIDEKKNEVVSLKEDLMRSFSLSDKMIYSMCQDSEGGIWIGTLFG 330

Query: 393  GLNRKERNSEDFTHYTREHGGLSHNS--VSALTADTDNHLWIGTWGGGLNLLDLKAPRQI 450
            G+N     +  F  +     G S N+  +  L  D   ++WIGT   G+++L+++    +
Sbjct: 331  GVNYLPNRNLQFDKFVPGSSGNSLNTKRIRELAEDVKGNIWIGTEDAGISVLNVE--NGV 388

Query: 451  LEVISSQTGGGFPINFIGVLNYDPINEGIWIGA-NQGLYFYDPVKKEITAPLPDKAAENI 509
            +  +     G    N +  L   P  + I+ G    GL         +    P +     
Sbjct: 389  IRQVKDHKSG----NHLVTLAVVPFQDQIYCGLFKAGLDVIQVPGYTVRHYTPSELKIGE 444

Query: 510  HGCIGSIIDKEGKLWVGCLEGVYIIDLHS------------------------------- 538
                   ID++G+ W+G   G+Y+ +  S                               
Sbjct: 445  GSVYVFHIDRKGRKWLGTGWGLYVAEAGSFNFVNVKETGYNWIFDLCEGKDGSVWIATMG 504

Query: 539  ----RSSKGEFQYRHLNYKLDDPSSRLIEKITCFYQGKDGTLWLGSNGYGIYQRKIDAQG 594
                R S     Y+    K ++P       ++   Q   G +W  ++  GI       + 
Sbjct: 505  SGVWRYSPQTDSYKKYESKENEPDGLSSNSVSSVMQDSKGRVWFSTDRGGICYYN---EE 561

Query: 595  KEQFISYSTAQGLPNNSVRGILEDNNGNLWISTNNGLSCYHQAENRFINYTIQDGLIDTQ 654
            K+ F++YS  +GLP++    ILED  GNLW  TN GL  +H  +N    +T +DGL+  Q
Sbjct: 562  KDNFVTYSIKEGLPDDVAYKILEDEEGNLWFGTNRGLVRFHPDKNDIRVFTTKDGLLGNQ 621

Query: 655  FYWNASCGSSHDLLYFGSVGGLVAIESNRPAMSLPAAKVRFTRLRIGNEEIL--PGSEYL 712
            F + ++  + +   YFG + GLVA +            +  ++  I N+E+        L
Sbjct: 622  FNYKSALKARNGKFYFGGIDGLVAFDPREAKTDDFVPPIYISKFSIYNKEVTVHTADSPL 681

Query: 713  SEDIAITTELKLHEKEKSFSLEFAALNFESNNTAIYSYRLVGFDDKWVQVPGNRRFASYT 772
             E I  T  + L+  E + S + A L++ +     Y YR+   D  W++   N+   SY 
Sbjct: 682  KECITHTDRIVLNYDESNISFDVALLSYSTAEANQYYYRMAPIDKDWIKAATNQNI-SYA 740

Query: 773  NLPPGSYTLQVRYTPDGENEGENITE-LKITIVPYFYKTVWFILFIIVLLSVSVWQFYQW 831
             LPPG YT QV+ T + +N G+ +   L I I+P ++ + W  +F  + L   V  ++ W
Sbjct: 741  KLPPGQYTFQVKATSN-DNGGQFVERSLSIEILPPWWFSPWAYVFYFIWLVCVVVSWFFW 799

Query: 832  RIRNLKRQKEYLHRTVEERTHELEQQKHLLENQTDELSRQNQMLIQQNEKITRQKAQLIR 891
                      Y HR    +  E+E+++ L E +                           
Sbjct: 800  ----------YKHR----KEKEMEERQKLFEIE--------------------------- 818

Query: 892  MSRKVQELTLDKISFFTNITHEFRTPITLIIGPIERALKLSY-NPQVIEQLNFVERNSKY 950
               K +EL   K++FFT I HE RTP+TLI GP+E   ++   +P++ + L+ + +N+  
Sbjct: 819  ---KEKELYESKVNFFTEIAHEVRTPLTLINGPLETLQEMEIADPKIQKNLSVITQNTNR 875

Query: 951  LLSLVNQLMDFRKVESGKLEIVKTRGNFLKFIDSLITPFEVFAQERNIVLKRYYRMEMPE 1010
            LL+L  QL+DF+K+ + K E+     +    +   +  FE    ++N  L  +   E  E
Sbjct: 876  LLTLTGQLLDFQKIGAHKFEMTMECVDITSLLRETVARFEPTISKKNKELALHIPEESIE 935

Query: 1011 ILYDEEAMRKVVTNLLSNAIKFTPNGGTVSLYLSALFAKDSEKETLYICVKDSGSGIPEE 1070
             + D+EA+ K+++NLL+NA+K+  +   V L          E E   + V   G  IP E
Sbjct: 936  AVVDKEAITKILSNLLNNALKYARHSICVEL--------QRETEAFLVRVTSDGDKIPAE 987

Query: 1071 DLNRIFNRFYQSQNQVKYPVYGQAGTGIGLYLCKRIVQMHGGEIKAFNNRHAGCSFRILL 1130
               +IF  FYQ+  +         G GIGL L + +  +H G++   ++ H   SF + +
Sbjct: 988  ISQQIFEPFYQAAKKDS----ASFGVGIGLPLARSLASLHRGKLY-LDSEHEDNSFVLSV 1042

Query: 1131 PLQRNERKDEKTIIIDHNDSSATPVQDSGSPKEKEALS--ILVVEDNADMRGYIRSILRE 1188
            PL  N  +    +      +  T     G P E E  S  +L+VEDN  M  ++   L E
Sbjct: 1043 PLVENTLRSLPKL---EEITVETDTLGEGVPVEAEMKSYVLLLVEDNETMLEFMSERLLE 1099

Query: 1189 QYHVLEAANGEEALHILNSNPIDFIISDLMMPVMDGIELSRRVKETFAISHIPFLMLTAK 1248
             + V  A NG+EAL +L S  ID +ISD+MMPVM+G EL + +K    +SHIP + LTAK
Sbjct: 1100 VFTVETAKNGQEALEVLRSRRIDLVISDIMMPVMNGWELCKEIKSDMDLSHIPVIFLTAK 1159

Query: 1249 TSQEARLESYRMGVDEYLLKPFDETLLLARIQNILENRKRYQRKFTLDMDVDVLNMEEES 1308
               ++++   ++G + Y+ KPF    L  +I ++L NR++ +  F+         M+   
Sbjct: 1160 NDIDSKINGLKIGAEAYVEKPFSFNYLKTQIVSLLYNRQKEREAFSKRPFFPTNKMQMNK 1219

Query: 1309 GDKKFLNQVMEVIKENYKNSYFEVSDFCEAVGVSKSLLNKKLQNLIGQSAGQFIRNYRLN 1368
             D++F+N+V+  I+EN  ++   V    E +G+S+S L +K++ L   S   FIR  RL 
Sbjct: 1220 VDEEFMNKVIRTIEENIIDTNLNVEHLAEILGMSRSSLLRKIKMLSNLSPVDFIRLIRLR 1279

Query: 1369 IARELILKNRETKNMNIAEVAYEVGFNDPKYFTRCFTKHFNVTP 1412
             A ELI + +      I ++ + VG N P YF++ F K F +TP
Sbjct: 1280 KAAELIHEGKYL----IGDICFMVGINSPSYFSKLFLKQFGMTP 1319