Pairwise Alignments

Query, 601 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 624 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  204 bits (518), Expect = 1e-56
 Identities = 193/656 (29%), Positives = 284/656 (43%), Gaps = 119/656 (18%)

Query: 11  LVLALAGSSCSDYLDKEYD--ASLSEKKVFNNQNLTREFLANIYTNLPDGLAPLSDDQFT 68
           L  A   +SCSDYLDK  D   S++ ++VF+++  T  FL   Y  LP       +D + 
Sbjct: 16  LTWAFVSTSCSDYLDKTPDDATSITLEEVFSSEIYTERFLLRAYDYLPCETNYNDNDYWA 75

Query: 69  GASRDCMTDNAVTCWGLHYYTKIGSDGY-------TAGDHPLLGFWNTDLYGIRKCNMFL 121
             +    +D     W      ++    +       ++        W     GIR+CN+FL
Sbjct: 76  LGAWSGASDEMNITWTYPMAKEMNRGSWNPKMLEGSSSQGTSYAMWWRYYEGIRQCNVFL 135

Query: 122 KNAKASVVGNTEKDGDDNRLYDRYCAEARLLRAIFHFDLICWFGAAPVIAEDESGEPIIF 181
           +N          K+         +  EAR +RA+ HF L+   G  P++           
Sbjct: 136 ENIDLCPAAQATKNV--------WICEARFMRAMLHFFLLRSHGPIPIMDHA-------- 179

Query: 182 DLSDPSAMNMF-RTPAAEALEWVADQCDQ-IKNQLPFRYSDEA-----SNWGRVNGAAAY 234
            L     M  F R    + ++++   C   I   LP  Y++ +     S +GR   AAAY
Sbjct: 180 -LKMDDEMTYFPRNTFDQCVDFIVSDCQYGIDGALPMIYTNASGTVAESLYGRATKAAAY 238

Query: 235 ALKARALLYRAS----------KLNNPDGNTAY-------WANAAQAAADFITQNNKQSY 277
           ALKAR LLY AS          K  N DG   +       W  AA AA + I +    SY
Sbjct: 239 ALKARVLLYAASPLFNGNADYAKFANEDGTLLFAPKDDSKWGKAAAAAKEAIDKIEGSSY 298

Query: 278 PYRLYNTGNPEN---DYYECFTTNPVYNNEIILARSV---WNTNQVEKVFLPVGFTGSFS 331
            Y LY +  P+N   +Y E F  +  +N E I AR+    ++ N  ++  +     G +S
Sbjct: 299 -YGLYYSDEPDNGYRNYMELFLPSKKWNKEYIFARNQGTGYSDNIHQEKCMAANGMGGWS 357

Query: 332 GNGRTNPTQNLVDAYEMSNGKR--IDEN----------------------GSTYDAA--N 365
           G     PTQ LVDAYEM+NG    I  N                      G  Y A   N
Sbjct: 358 G---LCPTQELVDAYEMANGSTPIIGYNADGTPIINGASGYSETGFAATAGKHYPAGVYN 414

Query: 366 PYKDRDPRLAQTIFYQGMMWGRADKEERRAIDVRYNSDADKGVDYTSAMGGTYTGYYLKK 425
            Y  R+PR   +I + G  W        R   + +      G++  S +    TGY L+K
Sbjct: 415 MYVGREPRFYASINFNGQQW--------RGRQLEFWQGGKDGIN-VSKVDYCCTGYLLRK 465

Query: 426 F----VNNISCKEPATYPHAWMIFRYGEILLNAAEAYNEAEGPA-KAYSYINEVRARAGM 480
                V+ I+ K       A ++FR G + L+ AEA NEAEGP    Y Y++ +R RAG+
Sbjct: 466 TADEGVDVINGK--GGMKEASILFRVGSLYLDYAEALNEAEGPVDDVYKYVDAIRKRAGL 523

Query: 481 PAYA-DMSQSELRERIRNERRIELAFE-DHRFFDVRRWKLYDNVTSTGETGKPRYNQLLN 538
           P  A  + + ++RERI++ER+IELAFE  HR+FD  RWK+ +  T  G            
Sbjct: 524 PGLAKGLDKDKMRERIQHERQIELAFEAGHRYFDCHRWKIAEK-TDNG-----------Y 571

Query: 539 LYGVKVTGNADTPSYTFGLAETVNSRTFVNPKSYYFPIPANEVKRAPNLGQNPGWD 594
           ++G+ +T    T    +    TV        K Y FPIP +E+ +   L Q+P W+
Sbjct: 572 MHGMNITA---TNKVDYSKRSTVGDSRVFEKKHYLFPIPQSEMDKRIGLVQSPYWE 624