Pairwise Alignments

Query, 509 a.a., L-arabinose isomerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 500 a.a., L-arabinose isomerase (EC 5.3.1.4) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  467 bits (1202), Expect = e-136
 Identities = 238/501 (47%), Positives = 321/501 (64%), Gaps = 9/501 (1%)

Query: 4   VFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKEVEA 63
           +FD YEVWFV G+Q LYG + +  V  H+  +VN LN   KLP K+V K    S  E+ A
Sbjct: 3   IFDNYEVWFVIGSQHLYGAETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTSPDEITA 62

Query: 64  VFKAANNDDKCVGVITWMHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMDFMN 123
           + + AN DD+C G++ W+HTFSPAKMWI+GL  L KPLL  HTQFN  +PWD++DMDFMN
Sbjct: 63  ICRDANYDDRCAGLVVWLHTFSPAKMWINGLSILNKPLLQFHTQFNAALPWDSIDMDFMN 122

Query: 124 LNQSAHGDREFGHICTRMRIRRKVVVGYWKEEETLHKIAVWMRVCAGWADSQDMLIIRFG 183
           LNQ+AHG REFG I  RMR +  VV G+W+++E   +I  WMR      D++ + + RFG
Sbjct: 123 LNQTAHGGREFGFIGARMRQQHAVVTGHWQDKEAHTRIGAWMRQAVSKQDTRQLKVCRFG 182

Query: 184 DQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMEYHKDIKNADVDALVATYFNDYDHDAS 243
           D M  VAVTDGDKV A+ + G+ V+     +L++    I + D++AL+  Y + Y    +
Sbjct: 183 DNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSIGDGDINALIDEYESSYTLTPA 242

Query: 244 LEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLASQRL 303
            +    +  Q V  AA+ EL ++  L+  G   FTT F+DL         Q+PGLA QRL
Sbjct: 243 TQIHG-DKRQNVREAARIELGMKRFLEQGGFHAFTTTFEDL-----HGLKQLPGLAVQRL 296

Query: 304 MAEGYGFGAEGDWKSAALYRTVWVMNQGLPKGCSFLEDYTLNFDGANSSILQSHMLEICP 363
           M +GYGF  EGDWK+AAL R + VM+ GL  G SF+EDYT +F+  N  +L SHMLE+CP
Sbjct: 297 MQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCP 356

Query: 364 LIAA-NKPRLEVHFLGIGIRKSQTARLVFTSKTGTGCTATVVDMGNRFRLIVNDVECIE- 421
            IA   KP L+V  LGIG  K   ARL+F ++TG    A+++D+G+R+RL+VN ++ ++ 
Sbjct: 357 SIAVEEKPILDVQHLGIG-GKEDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKT 415

Query: 422 PKPLPKLPVASALWIPMPNLEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMVH 481
           P  LPKLPVA+ALW   P+L   + AWILAGG HH+ FS+ L       +AEI  IE+  
Sbjct: 416 PHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALDLNDMRQFAEIHDIEIAV 475

Query: 482 INKDTTISCFKKELRMNEVYY 502
           I+ DT +  FK  LR NEVYY
Sbjct: 476 IDNDTHLPAFKDALRWNEVYY 496