Pairwise Alignments

Query, 457 a.a., outer membrane protein oprM precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 501 a.a., efflux transporter outer membrane subunit from Paraburkholderia sabiae LMG 24235

 Score =  218 bits (556), Expect = 3e-61
 Identities = 146/432 (33%), Positives = 230/432 (53%), Gaps = 19/432 (4%)

Query: 38  AQHQDTVSFGDQDWEEIYTDSTLRSLIDRALDHNKDMLIAAARIKEMAAQKRISTAALLP 97
           AQ  + V+ G+  W +++ D  L  L  +ALD N+++  A AR+KE  A  + + A L P
Sbjct: 58  AQPSEDVTRGE--WWKVFDDPKLNELEQQALDANQNLKAATARVKEARALNQAARAGLFP 115

Query: 98  DI-------KGKVTAERELENHGGDAFKKSDTFEAQFLVSWELDLWGNLRWARSASIAEY 150
            +       K +V+A    E  G D  +++  + AQ   S+E+DL+G +     A+ A+ 
Sbjct: 116 TLDAGFGPTKQRVSAASLFEPDGTDVPQQT-LWRAQATASYEVDLFGRVASTVDAAKADT 174

Query: 151 LQSVEAQRALQMTIVAEVAQAYYELVALDTELDIVKQTLKAREEGVRLARIRFEGGLTSE 210
            +S    R++ + + A+VAQ Y+ L  LD E D+  Q +  RE+ + L + RF+ G  +E
Sbjct: 175 QRSEALYRSVLLALQADVAQNYFALRELDAEADVFMQAVALREQSLALVQRRFDEGEITE 234

Query: 211 TSYRQAQVELARTATLVPDLERKISLKENDIAFLAGEYPNRIA-RSRLLQEFNFPETLPI 269
              ++A+ ELA   +    ++R  +  E+ +A L GE P   A     +Q  N    +P 
Sbjct: 235 LDVQRAKSELASARSDAMTVQRLRAASEHGLAVLLGETPAAFAITPNPIQAVNL--RIPP 292

Query: 270 GMPSTLLERRPDIRQAEQKLIAANAKVGVAYTNMFPRLALTGGFGSESTSLSELLK-SPY 328
           G+PS+LLERRPDI  AE+ + AANA+VGVA    FP L LTG  G ES +L +L K S  
Sbjct: 293 GLPSSLLERRPDIAAAERAMAAANARVGVAKAAFFPSLTLTGTGGFESATLGDLFKWSSR 352

Query: 329 AVMEG-----ALLTPIFGWGKNRAALKGKKAAYEAEIHSYEKTVLTAFKETRNAIVNFNK 383
           A + G     AL  P+F  G+ R  L   +A Y+ ++  Y + VL AF+E  + + +   
Sbjct: 353 AFLLGPLAGTALTVPLFDGGRRRGNLANARAVYDEDVAQYRQQVLVAFREVEDGLADLRI 412

Query: 384 IKEVYALRANLERSAKSYMDLAQLQYINGVINYLDVLDAQRGYFDAQIGLSNAIRDELIT 443
           ++     +    ++++   DL++ QY  G +NYLDVLDAQR    A+         +  +
Sbjct: 413 LETQTQTQDEALKASQRAADLSRKQYTEGAVNYLDVLDAQRTVLQARRTAVQLQGVQAAS 472

Query: 444 VVQLYKALGGGW 455
            V L +ALGGGW
Sbjct: 473 TVSLIRALGGGW 484