Pairwise Alignments

Query, 457 a.a., outer membrane protein oprM precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 517 a.a., efflux transporter outer membrane subunit from Paraburkholderia sabiae LMG 24235

 Score =  226 bits (576), Expect = 1e-63
 Identities = 154/485 (31%), Positives = 244/485 (50%), Gaps = 55/485 (11%)

Query: 16  ILTSCKVGKSYVRPDLHLPDSLAQHQDTVSFGDQ------------------------DW 51
           +L +C V  +Y RPD   P +  +   T +                            +W
Sbjct: 22  LLAACSVEPTYNRPDAPTPAAFKEAPVTTTTDAAATPLPASEAGTWKTAEPAEDAHRGEW 81

Query: 52  EEIYTDSTLRSLIDRALDHNKDMLIAAARIKEMAAQKRISTAALLPDIKGKVTAERELEN 111
             ++ DSTL  L  +A D N+D+  AAAR+++  A  + + A   P +       RE  +
Sbjct: 82  WIVFNDSTLNDLEKQAADANQDLKAAAARVQQSRALTQAARADWFPSLDAGFGPTRERLS 141

Query: 112 HGGDAFKKSDT-------FEAQFLVSWELDLWGNLRWARSASIAEYLQSVEAQRALQMTI 164
                F  +DT       + AQ   S+E+DL+G +    +A+ A+  QS    R++Q+ +
Sbjct: 142 PASQ-FLPNDTHVPTQTLWRAQATASYEVDLFGRVSSNVNAARADQAQSEALFRSVQLAL 200

Query: 165 VAEVAQAYYELVALDTELDIVKQTLKAREEGVRLARIRFEGGLTSETSYRQAQVELARTA 224
            A+VAQ Y++L   DT+L + +QT+  RE+ ++L   RF  G  +E    +A+ ELA   
Sbjct: 201 QADVAQNYFQLREFDTQLSLYRQTVTLREDALKLVERRFNEGDINELDVSRARNELATAR 260

Query: 225 TLVPDLERKISLKENDIAFLAGEYPNRIARSRLLQEFNFPET--------LPIGMPSTLL 276
                + R+ +  E+ +A L G+ P          +F FPET        +P G+PS LL
Sbjct: 261 ADAVGVARQRAASEHSLAILLGKPP---------ADFAFPETPLAPVTARVPAGLPSALL 311

Query: 277 ERRPDIRQAEQKLIAANAKVGVAYTNMFPRLALTGGFGSESTSLSELLK-SPYAVMEG-- 333
           ERRPDI  AE+ + AANA+VG+A +  FP+L +TG FG ES +L +L + S  A + G  
Sbjct: 312 ERRPDIAAAERAMAAANARVGLAKSAFFPKLDITGAFGFESATLGDLFQWSSRAFLLGPF 371

Query: 334 ---ALLTPIFGWGKNRAALKGKKAAYEAEIHSYEKTVLTAFKETRNAIVNFNKIKEVYAL 390
              AL  PIF  G+ +A L   +A Y+ +I  Y + VL AF+E  + + +   + +    
Sbjct: 372 AGTALTVPIFDGGRRKANLANARAKYDEDIAQYRQQVLVAFREVEDNLSDLRLLTDQTRE 431

Query: 391 RANLERSAKSYMDLAQLQYINGVINYLDVLDAQRGYFDAQIGLSNAIRDELITVVQLYKA 450
           + N   +++    L+Q QY  G + YLDV+DAQR    +Q+ LS+    + +  V L +A
Sbjct: 432 QNNAVNASQRAEHLSQTQYQEGQVAYLDVIDAQRQVLQSQLQLSHLAGTQAVATVNLIRA 491

Query: 451 LGGGW 455
           LGGGW
Sbjct: 492 LGGGW 496