Pairwise Alignments

Query, 457 a.a., outer membrane protein oprM precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 490 a.a., efflux transporter outer membrane subunit from Paraburkholderia sabiae LMG 24235

 Score =  270 bits (689), Expect = 1e-76
 Identities = 154/452 (34%), Positives = 253/452 (55%), Gaps = 9/452 (1%)

Query: 12  LFAGILTSCKVGKSYVRPDLHLPDSLAQHQDTVS-FGDQDWEEIYTDSTLRSLIDRALDH 70
           L A  L+ C +G +Y RP + +P +     +  S   + +W + + D  L  LI  AL +
Sbjct: 10  LCALTLSGCLLGPNYSRPQVEVPATYRFPDNYASDVANTEWWKQFDDPVLNDLITTALAN 69

Query: 71  NKDMLIAAARIKEMAAQKRISTAALLPDIKGKVTAERELENHGGDAFKKS-----DTFEA 125
           N D+ +AAAR+ +   Q   + AALLP +     AER+        F        ++++ 
Sbjct: 70  NNDVKVAAARVDQFLGQFVTTRAALLPHVDAGFDAERQRIPTTSPLFSNITSPVFNSYQL 129

Query: 126 QFLVSWELDLWGNLRWARSASIAEYLQSVEAQRALQMTIVAEVAQAYYELVALDTELDIV 185
               SWE+DL+G+ R    A+ A  L + EA+R   +T+V+ VA +Y  L +LD +L+I 
Sbjct: 130 ALSASWEIDLFGHNRRLTEAARASLLSTEEAKRGTILTLVSSVASSYINLRSLDRQLEIA 189

Query: 186 KQTLKAREEGVRLARIRFEGGLTSETSYRQAQVELARTATLVPDLERKISLKENDIAFLA 245
           K T  +R E V +  +RF+GG  S+    Q+Q E   + + +P +E +I+ +E+ ++ L 
Sbjct: 190 KATTSSRAESVHVFELRFKGGEVSQMELAQSQSEYEDSRSRIPQIESQIAQQEDALSVLL 249

Query: 246 GEYPNRIARSRLLQEFNFPETLPIGMPSTLLERRPDIRQAEQKLIAANAKVGVAYTNMFP 305
           G  P  I R R L E   P  +P G+PS LLERRPD+RQAEQ L++ANA++G A    FP
Sbjct: 250 GRNPGDILRGRALGELAAP-AVPAGLPSDLLERRPDLRQAEQDLVSANAQIGAAKALYFP 308

Query: 306 RLALTGGFGSESTSLSELLKSPYAV--MEGALLTPIFGWGKNRAALKGKKAAYEAEIHSY 363
           ++++TG  G++S   S+L   P  V    G++  PIF  G     +K  +A  +  ++SY
Sbjct: 309 QISITGLLGTQSGQFSKLFTGPARVWSFAGSVTQPIFEGGAIAGQVKQAEAVQQQALYSY 368

Query: 364 EKTVLTAFKETRNAIVNFNKIKEVYALRANLERSAKSYMDLAQLQYINGVINYLDVLDAQ 423
            K +  AF+E  +A+++  K++E + ++     +  +Y  +A+L+Y  G  +Y++VLDA+
Sbjct: 369 RKAIQVAFQEVDDALISSQKLREQFDIQGRQVEALATYAHMARLRYEGGYTSYIEVLDAE 428

Query: 424 RGYFDAQIGLSNAIRDELITVVQLYKALGGGW 455
           R  F+AQ+  +      L++ V LYKA+GGGW
Sbjct: 429 RSLFNAQLSQTQTQAGVLVSYVSLYKAMGGGW 460