Pairwise Alignments

Query, 498 a.a., putative outer membrane lipoprotein silC precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 451 a.a., Outer membrane protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 65.9 bits (159), Expect = 3e-15
 Identities = 57/291 (19%), Positives = 130/291 (44%), Gaps = 6/291 (2%)

Query: 189 KSITDQFYSVYMAQSNLEISREELVNAQQSYDIIKNKVEADLAAKDELFQAELNLATARS 248
           +++   F++V + +   E++   L              E   A K E+ + ++     R+
Sbjct: 156 ENVKKAFFTVLVNKERQELAEANLARIDTLLQETTALYEEGFAEKIEVSRVKVQYNNIRT 215

Query: 249 SVDESQVNLENAKDKLKQTLGMRLDEDILVFAEVEIKPIQVNLDQAISHGLGSRLELRQR 308
            +D+     E +K  LK  +G+ ++ +I V   +        + + + +    R+E+ Q 
Sbjct: 216 ELDKINAATEISKQLLKVQMGLPIEYEISVTESLRDLNQPQQIQELLDNPGYRRVEMDQL 275

Query: 309 EIESKELEFDMIKTKALNEFKGDVSISFGLIGDNSHLNKVYNNPT--QNPRVSISFAVPI 366
           +   + ++ D+           + + ++   G     N V+++        V ++  VPI
Sbjct: 276 QTNWELVKLDLKNNTVQYLPSLNANFTYQRNGAGQEFNTVWDSENWFTGAFVGLTLNVPI 335

Query: 367 FDWGEKKARIKAQKMAQRINELEFQEDKVD--IELNIRQVWRNLENLRTQIKIAEQNVQN 424
           FD   K  RI+  ++  ++ ++E Q D +D  IE+   Q   NL+N    + +  +N++ 
Sbjct: 336 FDGLAKAKRIQQNRI--QLQQIENQMDMLDDNIEVERFQARTNLQNNLKTLDVQRENMEL 393

Query: 425 AQLTYDLNQTRYREGDITGMEMSQFQTQLSNKKITYTQALINYRIELLNLK 475
           A   Y++++ +Y EG  + +E+ +  + L   +I Y  AL +  I  ++L+
Sbjct: 394 ATEVYEISRIKYSEGVGSNLEVVEADSDLVEAEINYYSALYDALISKVDLE 444



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 15/122 (12%)

Query: 150 LQLTQPIFT-------YNKRKMELKQIEYDYENANISYALQQLNTEKSITDQFYSVYMAQ 202
           L L  PIF          + +++L+QIE   +  + +  +++     ++ +   ++ + +
Sbjct: 329 LTLNVPIFDGLAKAKRIQQNRIQLQQIENQMDMLDDNIEVERFQARTNLQNNLKTLDVQR 388

Query: 203 SNLEISRE--ELVNAQQSYDIIKN--KVEADLAAKDELFQAELNLATARSSVDESQVNLE 258
            N+E++ E  E+   + S  +  N   VEAD     +L +AE+N  +A      S+V+LE
Sbjct: 389 ENMELATEVYEISRIKYSEGVGSNLEVVEAD----SDLVEAEINYYSALYDALISKVDLE 444

Query: 259 NA 260
            A
Sbjct: 445 KA 446



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 19/98 (19%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 358 VSISFAVPIFDWGEKKARIKAQKMAQRINELEFQEDKVDIELNIRQVWRNLENLRTQIKI 417
           ++++    IFD G     +KA +  ++++E + ++ + D+  N+++ +  +   + + ++
Sbjct: 116 ITVTVNQMIFD-GSYFVGLKAARTYRQLSEFDKEKTENDVIENVKKAFFTVLVNKERQEL 174

Query: 418 AEQNVQNAQLTYDLNQTRYREGDITGMEMSQFQTQLSN 455
           AE N+             Y EG    +E+S+ + Q +N
Sbjct: 175 AEANLARIDTLLQETTALYEEGFAEKIEVSRVKVQYNN 212