Pairwise Alignments

Query, 498 a.a., putative outer membrane lipoprotein silC precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 444 a.a., Outer membrane protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 93/449 (20%), Positives = 196/449 (43%), Gaps = 47/449 (10%)

Query: 27  GQIPLTIDKAMEIAQENSPSLRRSYMNLERYKQNLLAQKASLKSRFSLNLNPVDYNKNRR 86
           GQ+ LT+D+ ++ A +N P++++++++ ER                           +R 
Sbjct: 32  GQLELTLDQCIQYALDNGPAMQQAFLD-ERIG-------------------------DRE 65

Query: 87  FDNRLSQWYTNETFNTSGTFQVD-QPILWTDGTISLINRFGWQDNSSIIEGDKTSNRAFS 145
             + LS W+   + + +GT  +  Q  +  D  I+    FG   NSSI         +  
Sbjct: 66  IKSSLSGWFPQISASAAGTKNIKLQQQIIGDQLIT----FGQNYNSSI---------SLQ 112

Query: 146 NDLYLQLTQPIFTYNKRKMELKQIEYDYENANISYALQQLNTEKSITDQFYSVYMAQSNL 205
            D  L   + IF     K  +KQ ++D    N+  A     T   ++  FY V +    L
Sbjct: 113 VDQNLINREQIFAGRTSKY-IKQ-QWDQNKTNVEIA-----TVVDVSKAFYDVLLTYEQL 165

Query: 206 EISREELVNAQQSYDIIKNKVEADLAAKDELFQAELNLATARSSVDESQVNLENAKDKLK 265
           +I  E LV  Q+ Y   K++ E+ L  K +  +A + L+  RS+   +  +++     LK
Sbjct: 166 KIIDENLVRLQKQYSDAKSRYESGLVDKTDYQRAAITLSNTRSNKRRADESVDAKLAYLK 225

Query: 266 QTLGMRLDEDILVFAEVEIKPIQVNLDQAISHGLGSRLELRQREIESKELEFDMIKTKAL 325
           Q +G  +D  + +   VE    +   D +      +R+E +Q + E +  + +    K  
Sbjct: 226 QLMGYPVDASLALDYNVEAMEEKALTDTSQVMLPENRIEFQQIQTEEQLAQLNTGYQKWA 285

Query: 326 NEFKGDVSISFGLIGDNSHLNKVYNNPTQNPRVSISFAVPIFDWGEKKARIKAQKMAQRI 385
                  + ++  +  N+  +++Y+       + ++ ++PIF  G++   IK  ++ Q  
Sbjct: 286 YLPTLTANYNYNWLYFNNAFSQLYDRSYPTSGLGLTLSLPIFQGGKRHQDIKIAELQQEK 345

Query: 386 NELEFQEDKVDIELNIRQVWRNLENLRTQIKIAEQNVQNAQLTYDLNQTRYREGDITGME 445
             +E Q  +  I    +    N ++   + K  ++N+Q A+  Y++ + +Y EG    ++
Sbjct: 346 VSVEKQNLQKQINTEYKTALANYKSDLYEWKTIKENMQLAEEVYNIIKLQYDEGIKAYVD 405

Query: 446 MSQFQTQLSNKKITYTQALINYRIELLNL 474
           +   +T+L   ++++  A+ N     ++L
Sbjct: 406 LIVAETELRTAQLSHFNAMYNLMSSKIDL 434



 Score = 31.2 bits (69), Expect = 8e-05
 Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 41/224 (18%)

Query: 287 IQVNLDQAISHGLGSRLELRQ---------REIESK------ELEFDMIKTKALN---EF 328
           +++ LDQ I + L +   ++Q         REI+S       ++      TK +    + 
Sbjct: 34  LELTLDQCIQYALDNGPAMQQAFLDERIGDREIKSSLSGWFPQISASAAGTKNIKLQQQI 93

Query: 329 KGDVSISFGLIGDNSHLNKVYNNPTQNPRVSISFAVPIFDWGEKKARIKAQKMAQRINEL 388
            GD  I+FG                QN   SIS  V        + +I A + ++ I + 
Sbjct: 94  IGDQLITFG----------------QNYNSSISLQVD--QNLINREQIFAGRTSKYIKQ- 134

Query: 389 EFQEDKVDIEL----NIRQVWRNLENLRTQIKIAEQNVQNAQLTYDLNQTRYREGDITGM 444
           ++ ++K ++E+    ++ + + ++     Q+KI ++N+   Q  Y   ++RY  G +   
Sbjct: 135 QWDQNKTNVEIATVVDVSKAFYDVLLTYEQLKIIDENLVRLQKQYSDAKSRYESGLVDKT 194

Query: 445 EMSQFQTQLSNKKITYTQALINYRIELLNLKILSLYDFDKNIPL 488
           +  +    LSN +    +A  +   +L  LK L  Y  D ++ L
Sbjct: 195 DYQRAAITLSNTRSNKRRADESVDAKLAYLKQLMGYPVDASLAL 238