Pairwise Alignments

Query, 498 a.a., putative outer membrane lipoprotein silC precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 499 a.a., outer membrane efflux protein from Bacteroides ovatus ATCC 8483

 Score =  159 bits (402), Expect = 2e-43
 Identities = 126/495 (25%), Positives = 227/495 (45%), Gaps = 36/495 (7%)

Query: 8   LKRMLLTIVTFTGIALTSQGQIP-LTIDKAMEIAQENSP-------SLRRSYMNLERYKQ 59
           LK + +++       LT+Q Q   L++ + +EIA+  SP       S R +Y N + Y+ 
Sbjct: 12  LKLIFISLGLLLTELLTAQDQTTELSLKQVIEIARMESPDAQTARHSFRSAYWNYKYYRA 71

Query: 60  NLLAQKASLKSRFSLNLNPVDYNKNRRFDNRLSQWYTNETFNTSGTFQVDQPILWTDGTI 119
           N L          SL+L   D N NR   N+++    +  F       V+Q +L TD T+
Sbjct: 72  NYLP---------SLSLTS-DPNLNRAI-NKITMGDGSVKF-------VEQNLLNTDLTL 113

Query: 120 SLINRFGWQDNSSIIEGDKTSNRAFSNDLYLQLTQPI--------FTYNKRKMELKQIEY 171
           +L     W   S  +E        FS   Y   T PI        F YN  K + +    
Sbjct: 114 NLSQNLSWTGGSFFLETSAQRMDLFSEHKYSWQTSPIMIGYRQSLFGYNSLKWDRRIEPV 173

Query: 172 DYENANISYALQQLNTEKSITDQFYSVYMAQSNLEISREELVNAQQSYDIIKNKVEADLA 231
            Y+ A  SY         +  ++F+++  AQS+ +I+     NA   Y   + +      
Sbjct: 174 RYQEAKKSYVETLELVSANAINKFFALATAQSDYDIASFNYANADTLYRYAQGRYNIGTI 233

Query: 232 AKDELFQAELNLATARSSVDESQVNLENAKDKLKQTLGMRLDEDILVFAEVEIKPIQVNL 291
            ++E+ Q ELN  T  ++   + + ++N   +L+  LG+  D ++ V    +I    VNL
Sbjct: 234 TENEMLQLELNRLTEETNRMNALIEMDNCMQELRSYLGIHEDRELRVLVSPQIPDFSVNL 293

Query: 292 DQAISHGLGSRLELRQREIESKELEFDMIKTKALNEFKGDVSISFGLIGDNSHLNKVYNN 351
           ++A++    +  +++  E    E E  + K +A    K D+ + FGL      L   Y N
Sbjct: 294 NEALALAYENSPDIQTMERRKLESESAVAKARANAGLKADIYLRFGLTQTADKLPDAYRN 353

Query: 352 PTQNPRVSISFAVPIFDWGEKKARIKAQKMAQRINELEFQEDKVDIELNIRQVWRNLENL 411
                 VSI  ++PI DWG  K +++  +  + +   + ++ + D ELN+R++ +   NL
Sbjct: 354 LLDQQYVSIGISLPILDWGRGKGQVRVARSNRDLVYTQVEQSRTDFELNVRKLVKQF-NL 412

Query: 412 RTQ-IKIAEQNVQNAQLTYDLNQTRYREGDITGMEMSQFQTQLSNKKITYTQALINYRIE 470
           +TQ ++IA +  + AQ   ++ +  Y  G  T ++++   ++  + +  Y  AL NY   
Sbjct: 413 QTQRVRIAARTDETAQRRSEVARKLYLLGKSTILDLNASISEKDSARRNYISALYNYWSL 472

Query: 471 LLNLKILSLYDFDKN 485
              L+ ++LYDF++N
Sbjct: 473 YYTLRSMTLYDFERN 487