Pairwise Alignments

Query, 590 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 687 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 55.1 bits (131), Expect = 9e-12
 Identities = 56/237 (23%), Positives = 90/237 (37%), Gaps = 17/237 (7%)

Query: 50  KVLWINIDGAVGEVVKNSLPADGAIAKMLKNSKYSWTGVSDNRTLSVERNEDPVTWATML 109
           K L + IDG     +++++    A A        +WTG     TLS +   D   WAT+L
Sbjct: 57  KALVVEIDGLTHAALRDAVAQGKAPALQSLRIAPAWTGGIAG-TLSEQPTYDSQGWATLL 115

Query: 110 TGVIPEKHSITDESYTANVEYNPNNPNEKVIHYQNIISYISNNDVNMLSLCVTPWAKLNK 169
           TG    +H +     T  ++     P+   I  QN  +      V   +L          
Sbjct: 116 TGTWANRHGVRGTGGTQRIDAKLA-PSIFAIAKQNASAGYKTGAVTANALYPA------- 167

Query: 170 NMLNNAKTTITSENDVQTRDVVLN----HIANEDYTFILADFSGMLEAGKSGGFKADNAA 225
            +L N    I +  D    D  +      + +  Y  ++A +        + G K   A 
Sbjct: 168 -LLGNEPGAIDAAVDCAGADACVTDRTAQLIDAGYDLLVAQYGAPAAMVANSGLKG--AD 224

Query: 226 YVSALKTIDGYIGEFLSAIDARE-NAFYEDWLIVVTSNHGGSADGRYGGTSEVERNT 281
           Y  A+      +G+ L+ I  R  N   EDWL+++T+ HG    G  GG   +   T
Sbjct: 225 YQRAISDTSAAVGKLLARIAQRTANDSKEDWLVILTTGHGLDVFGTSGGQQAIADKT 281