Pairwise Alignments

Query, 503 a.a., Outer membrane binding protein for (+)-arabinogalactan (SusD-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 543 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 76.3 bits (186), Expect = 3e-18
 Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 44/278 (15%)

Query: 1   MKNIVLIMTLIVSCLFAGCDSLANKSEDKLSGDDFWAQGNETNAEAFLLSIYNSFRNATM 60
           + N  ++++   + L+ GC  L    E+  +   +W       AE+ L + Y+   +   
Sbjct: 4   LTNYTIMISACCTLLWTGCKDLDLAPENTFTDLTYWTSA--AKAESMLNTAYSQMFS--- 58

Query: 61  SQRPFLTYSGDMRCAPITAYSTGDKYVAYLANNDMGELRN----TYPDDARGGLIMQWDV 116
           S R F              Y+ G    AY    D     +    TY D + G L  QWD 
Sbjct: 59  SNRFF--------------YNEGASDNAYNGRGDNAGAASLAAGTY-DPSLGRLQSQWDN 103

Query: 117 FYTAIQDANILLAEIDKVPGMDELKRSRFKAEAIFMRSLSYFFIVRAFGDVPYY---TNA 173
            Y+AI+  NILL  ID+V  +DE +R R KAEA F+R+  +F ++  FGDVP      + 
Sbjct: 104 NYSAIKTCNILLENIDRVEDIDEGERERMKAEARFIRAYQHFQLMTWFGDVPLLDQDISI 163

Query: 174 YNEAPLPRTNMVIVLQNCLADLQPLLDDDPGAEVLPWSYSSYSSKGIRASRGSVIALMMH 233
            +   + RT    VL+  L++L      +  +EVLP       ++  R + G+ +AL   
Sbjct: 164 EDAQTISRTPKSQVLEFILSEL------EAASEVLPTQQELPEAERGRITSGAAMALKAR 217

Query: 234 INLWLVQFDAQNKEQYYRNVVSLGEELERNN--GAYSL 269
           ++L+         E  ++ VV+  E L   N  G Y L
Sbjct: 218 VHLY---------EGQWQEVVATTEPLIMGNEYGNYGL 246