Pairwise Alignments

Query, 503 a.a., Outer membrane binding protein for (+)-arabinogalactan (SusD-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 463 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 100/374 (26%), Positives = 169/374 (45%), Gaps = 59/374 (15%)

Query: 102 YPDDARGGLIMQ-WDVFYTAIQDANILLAEIDKVPGMDELKRSRFKAEAIFMRSLSYFFI 160
           + D A  G++   W  F   +   N++L +ID     D   + ++K EA+F+R+L+YF +
Sbjct: 91  FADKASNGILESAWANFNNGVYRCNLVLDKIDAAD-FDATLKKQYKGEALFVRALTYFNM 149

Query: 161 VRAFGDVPYYTNAYNEA---PLPRTNMVIVLQNCLADLQPLLDDDPGAEVLPWSYSSYSS 217
            R +G +P        A    + R++   V      DL  +++++    +LP SY+   +
Sbjct: 150 YRLWGGIPMTDKVVTVAEALKIGRSSEQQVFDFLTGDLNQVINEN----MLPSSYTGTDT 205

Query: 218 KGIRASRGSVIALMMHINLWLVQFDAQNKEQYYRNVVSLGEELERNNGAYSLLDINRSSV 277
              RA+ G+ +AL+  I L        +K    RNV+S      +  G YSL+       
Sbjct: 206 G--RATSGAAMALLGKIYLTF------HKWTEARNVLS------QLIGRYSLMP------ 245

Query: 278 IFAGGSDEGLFEIAQNINFNEIFMMNAKFSDNVSYSCLNKSMPLFCYSGDYLMT--LFPM 335
                + + +F++   +N   IF +  +F+ +V          +   + D   T  L   
Sbjct: 246 -----TPDKVFDVDNKMNDEIIFAV--RFNKDVEGEGHGYWFSIINLTDDTNQTKALKEC 298

Query: 336 YED-DARKELWFDEKIYSTSVSSSAPKEIKKFWNIDTYGNGTITSNSGNQIVFRYAGALL 394
           Y+D D RK+L    K+       +  K++K         + T  +   +QI+ RYA  LL
Sbjct: 299 YKDGDKRKDLITYVKVEDKVCVMNKFKDLK---------SATYNTVGNDQIILRYADVLL 349

Query: 395 LYAEALAALGTNDTK---ACELLNRVRNRAHASEINTSGSELMD------AIFWERCREL 445
           +YAEAL  +  ++++   A   LN V  RA  S +    +EL D      AI  ER +E 
Sbjct: 350 MYAEALNEISYSNSQTSDAMVALNAVHTRAGLSPVQI--TELADQDSFRKAIMLERQQEF 407

Query: 446 IGEGHYYYDLVRTG 459
             EGH ++DLVR G
Sbjct: 408 PYEGHRWFDLVRMG 421