Pairwise Alignments

Query, 584 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 551 a.a., TPR-repeat-containing proteins (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  111 bits (278), Expect = 7e-29
 Identities = 131/547 (23%), Positives = 228/547 (41%), Gaps = 40/547 (7%)

Query: 44  PDSALNLLKGIHDPEKLWGESQATYALLMTQAMDKNYMKFSSDSLIALALNYYTITQTSP 103
           PDSAL +LK +          QA YALL ++A+DKN++K + DSLI  A ++Y       
Sbjct: 38  PDSALTILKQLRQEGSQ--AEQARYALLYSEALDKNHIKVTDDSLIRQAWSHYKHYSKDL 95

Query: 104 IMYAKALFYHGRVMLELDKEEEALKSFLAAKDVYERTKDHKMLALIAEEVGMINRKQDLY 163
               K L+Y GR+ L    +  AL+ FL  ++  + T +     L+  ++G +  +Q  Y
Sbjct: 96  RHQCKTLYYWGRIKLRAGDKPGALRLFLKIEEKLKDTNEPYYTGLLYGQIGEVYYEQMNY 155

Query: 164 DDALTNFREALTTYKQLKDSLSVISASLNIARVYLFKSEWDSCSLYYNNALEIA-VQKNY 222
             A   FREA   ++Q  +      ++L++A       + +     Y  AL++A  QKN 
Sbjct: 156 SRAYHYFREARNNFRQSDNVREETESTLDMAAAAFHSKDIEKAMRLYAAALDLADEQKND 215

Query: 223 LSEITILHELGILYRSMQNLSEAERYFLAAYEKETDEEKKYMECLSLGYLYMQMGQTENA 282
                 L  L  LY  +    +     L   E    ++  Y    +L  + +   + ++A
Sbjct: 216 HLAKASLTNLASLY-VVSGKRQIPHDLLQRIELSARQDTLY-GYHTLVDVNLLKNRIDSA 273

Query: 283 RKYLIMS-ANSSKAYTQISAYDCLYFLEKDIDNFEEAIVYHELADSITNAMEELNSRELI 341
           R YL ++ A ++            Y +E    NFE+A         +T+++   N +   
Sbjct: 274 RYYLALAEAQTTDIRDLADLQYTAYRIEAQTRNFEKATDNIHRYIYLTDSLTRSNMQFSA 333

Query: 342 ASLQKKYENEKLRNDNLQMKVRYTNFILWGTIAFLFVVACMCYYYYKNRNNKKKIAEIEL 401
             ++++Y  E+      +MK R T  I   T+  L +   + YY  + R          L
Sbjct: 334 GMVEREYFKERTDFAEYRMKNRTTWEIAAATVILLMI--GVAYYITRQR----------L 381

Query: 402 QIQENEEEIERYQQEIEDIQISKDQVLKENLMLEENRTKVGELNGKIV----LLTMQNKT 457
           ++Q   E  +RY    E+   S+ + L E   +E  R     L G I     ++    KT
Sbjct: 382 RLQ--RERTDRYLLLAEEAN-SEYKTLTER--MEGQRNTENHLKGLIASRFDIIDKLGKT 436

Query: 458 LSEHLKELGGELNVGISSGSFIHAFRLLLAIKEGTLRGKLSNEERQKLFSLFDLIYWNYV 517
             E       E      +  F    +++    E       +NE  Q+L  + +  + N +
Sbjct: 437 YYER------ENTASQQAAMFHEVKQIITDFAE-------NNEMLQELELIVNTCHDNAM 483

Query: 518 SRLLERAPTLTKHDLEICCFLKFGLSHEELSCIFHTTSDSVTRAKGRLKGRLGISPQDDL 577
            +L    P + + D+ + C++  G S + +S     T  +V   K RLK R+  +   + 
Sbjct: 484 QKLRNDFPAMKEADIRLLCYIFVGFSPQVISLFMKDTVANVYARKSRLKSRIKSAETANK 543

Query: 578 DLFLKEF 584
           DLFL  F
Sbjct: 544 DLFLSLF 550