Pairwise Alignments

Query, 584 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 561 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  138 bits (347), Expect = 7e-37
 Identities = 137/592 (23%), Positives = 272/592 (45%), Gaps = 59/592 (9%)

Query: 12  FFILSFLAVSCHRDTDALNMTFSKVEKCMDLCPDSALNLLKGIHDPEKLWGESQATYALL 71
           F +L FL  +CH   D L      +E+ + L PDSAL+LL+ I  PEKL   ++A YALL
Sbjct: 10  FILLGFLLTACHHTADRL----LSIEQLIKLKPDSALSLLRQIQYPEKLSDSNRALYALL 65

Query: 72  MTQAMDKNY-MKFSSDSLIALALNYYTITQTSPIMYAKALFYHGRVMLELDKEEEALKSF 130
           MTQ ++++   +  SDSLI++A++YY  T T  +  A A +  G V ++ +  E +L +F
Sbjct: 66  MTQVINQSSDEEHKSDSLISVAIDYYKGT-TDSVHAALAYYNAGLVAMDNEDSEASLHNF 124

Query: 131 LAAKDVYERTKDHKMLALIAEEVGMINRKQDLYDDALTNFREALTTYKQLKDSLSVISAS 190
           L   D    + + ++  ++  ++  +   + + D+ L   + AL   ++  + L + +  
Sbjct: 125 LKTIDWLGESDNDELQFMVRYKMSRLFNLRLIPDEELRLGKAALPYAERTGNPLYICALL 184

Query: 191 LNIARVYLFKSEWDSCSLYYNNALEIAVQKNYLSEIT-ILHELGILYRSMQNLSEAERY- 248
             I   ++  ++ DS   Y   A+++A ++N +  ++ I  +   L  +M++  +A  Y 
Sbjct: 185 PYITHGFMQTNQLDSAYKYSVQAIQLAEKENLVRALSHIYSQHAHLCMAMKDYKQALMYR 244

Query: 249 --FLAAYEKETDEEKKYM--ECLSLGYLYMQMGQTENARKYLIMSANSSKAYTQISAYDC 304
              LA   +   EE +Y+    ++      ++ Q ++A  Y I  A       Q +    
Sbjct: 245 DKDLAILFELFGEENEYIYDHYINKANTLTELHQYDSA-FYYINKAVEDTTDIQYTTRKS 303

Query: 305 LYFLE--KDIDNFEEAIVYHELADSITNAMEELNSRELIASLQKKYENEKLRNDNL---- 358
           L   E        + A  Y      + + + E   +E + +L + Y N++L+  N     
Sbjct: 304 LAKAEIYAATGQMDSAYYYMNRHADLRDRLIEERDKEGLLTLHRNYHNDELKKANTRLWQ 363

Query: 359 QMKVRYTNFILWGTIAFLFVVACMCYYYYKNRNNKKKIAEIELQIQENEEEIERYQQEIE 418
           Q   R     +   +  L ++  +C Y++  +  ++++   + QI  +++E+ +Y +EIE
Sbjct: 364 QAVERKLQLYVVTIVCCLAILLGVCIYFFLYKRKQQEVLRQKGQI-AHQQELLKY-REIE 421

Query: 419 DIQISKDQVLKENLMLEENRTKVGELNGKIVLLTMQ-----NKTLSEHLKELGGELNVGI 473
            +Q  KD        L E + +  ++  K  LL ++     N+T    ++    + N+  
Sbjct: 422 KLQAEKD--------LSEAKEREAQIREKEALLKVEFFKRLNETCIPVIENPKTQQNI-- 471

Query: 474 SSGSFIHAFRLLLAIKEGTLRGKLSNEERQKLFSLFDLIYWNYVSRLLERAPTLTKHDLE 533
                                  L +E+ + +F   + I+ N+  RL  + P L + DL 
Sbjct: 472 ----------------------MLKDEDWKVIFKNANSIFLNFTERLKNQYPALNEEDLR 509

Query: 534 ICCFLKFGLSHEELSCIFHTTSDSVTRAKGRLK-GRLGISPQDDLDLFLKEF 584
            CC +K   S  +++ I H   DSV +   R++  ++GI+ +  L+  L++F
Sbjct: 510 YCCMVKMQFSQTDIAKIMHLEKDSVKKRLKRIRTEKMGIAQETTLEAVLRDF 561