Pairwise Alignments

Query, 462 a.a., transglycosylase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 486 a.a., murein transglycosylase from Pseudomonas simiae WCS417

 Score =  179 bits (453), Expect = 2e-49
 Identities = 138/461 (29%), Positives = 228/461 (49%), Gaps = 31/461 (6%)

Query: 3   AKTLILP-LFLILLCCVFGCRNKHHTEKNETAHDLPQIKDSGELVVLTLYSSTSYFIYRG 61
           AK LI   LFL+L  CV         +K  T   L +IK+ G L V+T  S  +YF  R 
Sbjct: 12  AKWLIATGLFLMLSACV---------DKPST---LERIKEDGVLRVVTRNSPATYFQDRN 59

Query: 62  QEMGFQYELSEQFAKSLGLKLRIEVARNVRELIQKLQSGEGDMIAYNLPITKEWKDSLLY 121
            E GF+YEL ++FA  LG+KL IE A N+ +L  +L    G ++A    ++ E + + + 
Sbjct: 60  GETGFEYELVKRFADDLGVKLEIETADNLDDLFGQLGKPNGPVLAAAGLVSSEQRQTQVR 119

Query: 122 CGEDI--ITHQVIVQQGNGKHKPLKDVTELIGKDIYVKPGK-YYDRLVNLNNELGGGIHI 178
                  +T Q+I +  NG+ +P  +  +L+GK I V  G  + ++L  L  +      I
Sbjct: 120 FSHPYLEVTPQIIYR--NGQSRP-TNAADLVGKKIMVLKGSTHAEQLAELKKQ---NPAI 173

Query: 179 HKITGDSVTAEDLITQVAQGKIPYTVADNDLAKLNKTYYPNLNIDLSISFDQRSSWAVRK 238
                D+V   DL+  V +G+I  T+ D++   +N+ Y+PN+ +   +      SWAV  
Sbjct: 174 EYEESDAVEVVDLLRMVDEGQIDLTLVDSNEVAMNQVYFPNVRVAFDLGNASNQSWAVAA 233

Query: 239 DSPELAAAATNWHKENMTSPAYTASMK-RYFENSKMMPHSPILSLK---EGKISHYDDLF 294
                     N + + +        +K RY+ +  ++ +    +     + ++  Y+  F
Sbjct: 234 GEDNSLLNEINSYLDKVEKNGTLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPKYEKHF 293

Query: 295 KKYAQEIGWDWRMLASLAYTESNFDTTAVSWAGAKGLMQLMPATARAMGVPAGKEQNPEE 354
           + YA+    DWR+LA++ Y ES +     S  G +GLM L   TA+AMGV      +P++
Sbjct: 294 RAYAKAEKVDWRLLAAIGYQESLWQPAVTSKTGVRGLMMLTQNTAQAMGV--SNRLDPKQ 351

Query: 355 SIKAAVKYIAATDRSFNMIPDKQERLNFILASYNAGLGHIYDAMALAKKYGKNNLVWKDN 414
           SI    KY+A      +    + +R  F LA+YN G GH+ DA  LAK+ G N   W D 
Sbjct: 352 SIMGGAKYLAKIKDELDDSIAEPDRTWFALAAYNVGTGHLEDARTLAKREGLNPNKWLD- 410

Query: 415 VENFILLKSNEEYFTDPVCKNGYFRGIETFNFVRDIQSRFE 455
           V+  +   S +++++    + GY RG E  +FV +I+  ++
Sbjct: 411 VKKMLPRLSQKQWYSK--TRYGYARGGEPVHFVANIRRYYD 449