Pairwise Alignments

Query, 462 a.a., transglycosylase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 473 a.a., glycosylase from Pseudomonas simiae WCS417

 Score =  111 bits (278), Expect = 4e-29
 Identities = 106/444 (23%), Positives = 192/444 (43%), Gaps = 39/444 (8%)

Query: 6   LILPLFLILLC--------CVFGCRNKHHTEKNETAHDLPQIKDSGELVVLTLYSSTSYF 57
           +I P  L++LC         V          K     DL +I+ S  L VL   S  S  
Sbjct: 1   MIRPSALLMLCLTLLLPVAAVARLDGPLEVTKPGKVRDLAEIRSSRTLRVLVNQSRNSSG 60

Query: 58  IYRGQEMGFQYELSEQFAKSL------GLKLRIEVARNVRE-LIQKLQSGEGDMIAYN-- 108
             +GQ +G +Y     F + L      G ++ +++    ++ L+  L  GEGD++A    
Sbjct: 61  EVQGQAIGVEYHRLRAFEQYLNGHARDGQEINLKIIPKAKDQLLGALARGEGDLVAPGEL 120

Query: 109 LPITKEWKDSLLYCGEDIITHQVIVQQGNGKHKPLKDVTELIGKDIYVKPGKYY-DRLVN 167
           L +    K S     + I++   +   G    +    + +L G+ + +  G    D +  
Sbjct: 121 LDVKAAHKIS---ASDPIVSDVPLWLVGVKGERRFTKLEQLSGRTLALTTGSAAADAISQ 177

Query: 168 LNNELGGGIHIHKI-------TGDSVTAEDLITQVAQGKIPYTVADNDLAKLNKTYYPNL 220
           +N +L     +HK           ++  ED++  V  G    T+ +  +A+      P L
Sbjct: 178 VNQKLA----LHKQPPVKVEWVDPTLAVEDVLEMVQAGIFHLTIVEKPIAERWSKILPKL 233

Query: 221 NIDLSISFDQRSS--WAVRKDSPELAAAATNWHKENMTSPAYTASMKRYFENSKMMPHSP 278
             D  ++  +     W VR+D+  L A+   + K   T      + +R +     +  +P
Sbjct: 234 RFDKQVAISEPGDEYWFVRQDASMLRASIDRFLKTYRTPADQDVAFQRIYRRLYQV-RNP 292

Query: 279 ILSLKEGKISHYDDLFKKYAQEIGWDWRMLASLAYTESNFDTTAVSWAGAKGLMQLMPAT 338
           +  +   ++     + +K+A+E G DW  LA+LA+ ES  D  A +  G  GLMQ+ P+ 
Sbjct: 293 LARVDRQRLEKLRPVLQKHAREQGMDWLNLAALAFKESALDPGARNSGGPTGLMQITPSA 352

Query: 339 ARAMGVPAGKEQNPEESIKAAVKYIAATDRSFNMIP--DKQERLNFILASYNAGLGHIYD 396
           A+ +GV     ++ + +++A  +Y+A   R F   P  +++ER+ F+LA+YN G   +  
Sbjct: 353 AQRVGV--NNIESLDSNVQAGARYLAMIRRKFFASPKLNERERMAFVLAAYNMGPERVQG 410

Query: 397 AMALAKKYGKNNLVWKDNVENFIL 420
               AK+ G N   W   VE   +
Sbjct: 411 MRTEAKRRGLNPNQWFFQVERIAM 434