Pairwise Alignments

Query, 462 a.a., transglycosylase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 485 a.a., membrane-bound lytic murein transglycosylase F from Pseudomonas putida KT2440

 Score =  172 bits (436), Expect = 2e-47
 Identities = 141/455 (30%), Positives = 221/455 (48%), Gaps = 34/455 (7%)

Query: 10  LFLILLCCVFGCRNKHHTEKNETAHDLPQIKDSGELVVLTLYSSTSYFIYRGQEMGFQYE 69
           LFL+L  CV         EK  T   L ++K+ G L V+T  S  +YF  R  E GF+YE
Sbjct: 20  LFLLLGACV---------EKPST---LERVKEDGVLRVITRNSPATYFQDRNGETGFEYE 67

Query: 70  LSEQFAKSLGLKLRIEVARNVRELIQKLQSGEGDMI-AYNLPITKEWKDSLLYCGEDI-I 127
           L + FA  LG+KL+IE A N+ EL   L    G ++ A  L  ++  K  + Y    + +
Sbjct: 68  LVQHFADDLGVKLQIETADNLDELYDALGKPSGPVLAAAGLVSSERRKTQVRYSHPYLEV 127

Query: 128 THQVIVQQGNGKHKPLKDVTELIGKDIYV-KPGKYYDRLVNLNNELGGGIHIHKITGDSV 186
           T QVI +  NG+ +P      L+GK I V K   + D+L  L  +      +     D+V
Sbjct: 128 TPQVIYR--NGRPRP-TGAKGLVGKKIMVLKGSSHADQLAELKKQYPA---LQYEESDAV 181

Query: 187 TAEDLITQVAQGKIPYTVADNDLAKLNKTYYPNLNI--DLSISFDQRSSWAVRKDSPELA 244
              DL+  V +G+I  T+ D++   +N+ Y+PN+ +  DL  + DQR  WAV        
Sbjct: 182 EVVDLLRMVDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGETRDQR--WAVAAGEDNSL 239

Query: 245 AAATNWHKENMTSPAYTASMK-RYFENSKMMPHSPILSLK---EGKISHYDDLFKKYAQE 300
               N + +          +K RY+ +  ++ +    +     + ++  Y+  FK YA+ 
Sbjct: 240 LNEINEYLDKAQKNGTLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPKYEKHFKSYAKV 299

Query: 301 IGWDWRMLASLAYTESNFDTTAVSWAGAKGLMQLMPATARAMGVPAGKEQNPEESIKAAV 360
              DWR+LA++ Y ES +     S  G +GLM L   TA+AMGV      +P +SI+   
Sbjct: 300 EQVDWRLLAAIGYQESMWQPEVTSKTGVRGLMMLTQRTAQAMGV--SNRLDPRQSIQGGA 357

Query: 361 KYIAATDRSFNMIPDKQERLNFILASYNAGLGHIYDAMALAKKYGKNNLVWKDNVENFIL 420
           KY        +    + +R  F LA+YN G GH+ DA  LAK+   N   W D V+  + 
Sbjct: 358 KYFMKIKEELDDSIKEPDRTWFALAAYNVGGGHLEDARTLAKREKLNPNKWLD-VKKMLP 416

Query: 421 LKSNEEYFTDPVCKNGYFRGIETFNFVRDIQSRFE 455
             + ++++     K GY RG E  +FV +I+  ++
Sbjct: 417 RLAQKQWYRQ--TKYGYARGGEPVHFVANIRRYYD 449