Pairwise Alignments

Query, 462 a.a., transglycosylase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 505 a.a., Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein from Kangiella aquimarina DSM 16071

 Score =  144 bits (362), Expect = 9e-39
 Identities = 118/464 (25%), Positives = 214/464 (46%), Gaps = 24/464 (5%)

Query: 1   MSAKTLILPLFLILLCCVFGCRNKHHTEKNETAHDLPQIKDSGELVVLTLYSSTSYFIYR 60
           ++ K L L L ++    +  C         E  + L +++  G + V T  S T+ ++  
Sbjct: 5   LTIKLLGLALVIVSALFLTSC-------SEEPKNQLERVQQQGYIKVYTRISPTTMYVGE 57

Query: 61  GQEMGFQYELSEQFAKSLGLKLRIEVARNVRELIQKLQSGEGDMIAYNLPITKEWKDSLL 120
               GF+Y+L + FA  LG++++I    ++ ++++++ SG  D  A  L +T++ ++ L 
Sbjct: 58  EGFSGFEYDLVKLFADELGVRVQIVTENDIAKILREVSSGRADFAAAGLTVTQQREEFLR 117

Query: 121 YCGE-DIITHQVIVQQGNGKHKPLKDVTELIGKDIYVKPGKYYDRLVNLNNELGGGIHIH 179
           +      IT +++ +QGN + +    V + +     V    + + L+    +     ++ 
Sbjct: 118 FGPPYQEITSKLVYKQGNDRPRDFSQVDKNL---TVVANSSHSEELLKAQKDYP---NLS 171

Query: 180 KITGDSVTAEDLITQVAQGKIPYTVADNDLAKLNKTYYPNLNIDLSISFDQRSSWAVRKD 239
                 +T +DL+  V  G   YT+ D++  +L +   P L +  SI+  +  +WA  KD
Sbjct: 172 WTERSDLTPQDLLDGVLDGTFDYTIVDSNELQLARQVQPELAVAFSITEPEPLAWAFPKD 231

Query: 240 SP-ELAAAATNWHKENMTSPAYTASMKRYFEN-SKM--MPHSPILSLKEGKISHYDDLFK 295
           S   L   A  +  +           +RY+ + SK   + +   L   E K+  Y   F 
Sbjct: 232 SDNSLYIKAIEFFSKIRGDGTLAYLTERYYGHLSKFDYVGNREFLRAIEDKLDKYRPYFY 291

Query: 296 KYAQEIGWDWRMLASLAYTESNFDTTAVSWAGAKGLMQLMPATARAMGVPAGKEQNPEES 355
           + A     DWR+LA++ Y ES+++  A S  G +GLM L   TA+ +GV      + E+S
Sbjct: 292 EAAAN-DLDWRLLAAMGYQESHWEPHARSPTGVRGLMMLTLNTAKQLGVK--NRLDAEQS 348

Query: 356 IKAAVKYIAATDRSFNMIPDKQERLNFILASYNAGLGHIYDAMALAKKYGKNNLVWKDNV 415
           I     Y+           ++ +R  F LA+YN G GH+ DA  LA+  G N   W D  
Sbjct: 349 ILGGADYLRLVKEKIPDRIEEPDRTWFALAAYNVGYGHLEDARRLAEGDGANPDKWLDVK 408

Query: 416 ENFILLKSNEEYFTDPVCKNGYFRGIETFNFVRDIQSRFESYKK 459
           E   LL+  + Y      + GY RG E   +V +I+  ++  K+
Sbjct: 409 EYLPLLRQKKWYSR---TRYGYARGDEPVKYVNNIRMYYQVLKQ 449