Pairwise Alignments

Query, 635 a.a., NADH:ubiquinone oxidoreductase subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 451 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

 Score =  317 bits (812), Expect = 7e-91
 Identities = 163/396 (41%), Positives = 235/396 (59%), Gaps = 4/396 (1%)

Query: 169 IEEYIAREGYFALADCLLNKQPADVIDIIKRSGLRGRGGGGFPTGLKWEFASKQVS-NVK 227
           ++EY A+ GY A      +    D++  +K +GL+GRGG GFPTG+KW    K  S N++
Sbjct: 34  LDEYQAKNGYAAARKAFADMAQDDIVQTVKDAGLKGRGGAGFPTGVKWGLMPKDESINIR 93

Query: 228 YVVCNADEGDPGAFMDRSIMEGDPHSIVEAMCICGYSIGSSKGLVYIRAEYPLAINRLKK 287
           Y++CNADE +P  + DR +ME  PH ++E M I   ++ + +G +++R EY  A   L +
Sbjct: 94  YLLCNADEMEPNTWKDRMLMEQLPHLLIEGMLISARALKTYRGYIFLRGEYTTAAKHLNR 153

Query: 288 AIEQAREYGLLGDHILGTDFSFDIEIRYGAGAFVCGEETALIHSMEGKRGEPTLKPPFPA 347
           A+E+A+  GLLG +ILG+ F F++ +  GAG ++CGEETALI+S+EG+R  P  KPPFPA
Sbjct: 154 AVEEAKAAGLLGKNILGSGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 213

Query: 348 ESGYLGKPTNVNNVETLANIPIILTKGAEWFASIGTERSK--GTKVFALAGKINNVGLIE 405
             G  GKPT VNNVETL N+P I+  G +W+ S+  E S+  GTK+   +GK+ N GL E
Sbjct: 214 AVGVWGKPTCVNNVETLCNVPAIIADGVDWYKSLAREGSEDMGTKLMGFSGKVKNPGLWE 273

Query: 406 VPMGTTLREVIYEIGGGIKGGKKFKAVQTGGPSGGCLTEKHLDTPIDFDNLLAAGSMMGS 465
           +P G T RE+  +  GG++ G   KA Q GG   G L  +HLD  +    +   G+ MG+
Sbjct: 274 LPFGVTARELFEDYAGGMRDGYTLKAWQPGGAGTGFLLPEHLDAQMYAGGIGKVGTRMGT 333

Query: 466 GGMIVMDEDDCMVSVARFYLDFTVEESCGKCTPCRIGNKRLLELLNKITEGRGTEKDLDT 525
           G  + +D    MVS+ R    F   ESCG CTPCR G    ++LL  +  G G E D++T
Sbjct: 334 GLAMAVDNTVNMVSLLRNMEQFFARESCGFCTPCRDGLPWSVKLLMALENGEGREGDIET 393

Query: 526 LATL-GRVIKDTALCGLGQTSPNPVLSTLDNFRDEY 560
           L  L G +      C     +  P+ S +  FR E+
Sbjct: 394 LLGLVGFLGPGKTFCAHAPGAVEPLGSAIKYFRSEF 429