Pairwise Alignments

Query, 302 a.a., conserved protein found in conjugate transposon (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 262 a.a., conjugative transposon protein TraN from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 70/299 (23%), Positives = 134/299 (44%), Gaps = 40/299 (13%)

Query: 1   MKKLIIMFALLLGVVSMKAQSNDLYQGITKKLPYRQMVTPYGVQVTFAKTVHIIFPSAVK 60
           MKKL++++ L   + S  AQ +                    V V  + + HI+ P  ++
Sbjct: 1   MKKLLLLYVLFALLFSASAQDSLQV-----------------VHVHESISTHIVSPEPIQ 43

Query: 61  YVDLGSNYIIAGKADGAENVVRVKATTEGF-PGETNFSVICEDGSFYSFNAKYAHE-PEM 118
           YVD+ ++ + AG    A N++RVK    G  PG     +I   G  +    K A+   + 
Sbjct: 44  YVDISTDDV-AGDIPVA-NILRVKPKHGGAKPG-----IITIVGERFLVQYKLAYSRADR 96

Query: 119 LNIEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQSIYKNNDREIKHLGCKRF 178
            + E++  ++     D+ +  + +   ++   + L ++            +   +  K  
Sbjct: 97  ADTEVR--IDPTQVDDYLNPAVAMSREDMARFALLALQ---------RKPQFNSVNSKGQ 145

Query: 179 GVQFLVKGIYSHNGLFYFHTQTKNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRS 238
           G+   +  IY+    F+     +N +N+P+  D IRFKI DKKV K T  Q+  + P  +
Sbjct: 146 GMLAKLNNIYTVGDYFFIDLSLRNDTNIPYTIDQIRFKIEDKKVVKATNFQQVEMQP--T 203

Query: 239 YNEILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKN-GGRHQTIRVENSDVVAAKVI 296
           +        K   R V+   +FT P++K+  IE+ E+   GR  +++++ SD++ A  +
Sbjct: 204 FQLYDTGSFKRKYRNVFVFKKFTFPEEKVFNIEVAEEQISGRTISLKIDYSDILHADTL 262