Pairwise Alignments

Query, 302 a.a., conserved protein found in conjugate transposon (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 280 a.a., Bacteroides conjugative transposon TraN protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  118 bits (296), Expect = 1e-31
 Identities = 83/267 (31%), Positives = 133/267 (49%), Gaps = 25/267 (9%)

Query: 37  MVTPYGVQVTFAKTVHIIFPSAVKYVDLGSNYIIAGKADGAENVVRVKATTEGFPGETNF 96
           ++TPY V+V + +T  +IFP+ +K  D G+  ++A K   A NV+++KA   GF  E+N 
Sbjct: 26  VLTPYPVEVGWDQTTVLIFPAKIKSADRGNGNVLAQKDAYAANVLKLKAGKRGF-SESNL 84

Query: 97  SVICEDGSFYSFNAKYAHEPEMLNIEMKDFLENE------DTTDFSHTRMNIYFRELGNE 150
            V+ EDG  Y F   Y  +P+ L I++    + E      + TD    +++    ++  E
Sbjct: 85  HVVTEDGKIYPFTVHYNPKPDKLTIDIGKQQQMEAAVAVLENTDIGREQLDRLSGKVFQE 144

Query: 151 SPLLVKLIMQSIYKNNDREIKHLGCKRFGVQFLVKGIYSHNGLFYFHTQTKNSSNVPFDT 210
              L        Y+++         K   V+  +KGIYSH  + +F  + KN S +    
Sbjct: 145 KGFL--------YRSD---------KNGKVKLRLKGIYSHREVLFFLFELKNRSRIACPI 187

Query: 211 DFIRFKIVDKKVAKRTAIQETVIDPVR-SYNEILVIGGKSTVRTVYTVPQFTIPDDKILV 269
              RF I D+K  KRTA ++  + P+   Y +   I GK   R V    QFTI D K +V
Sbjct: 188 QQWRFVIQDRKQVKRTAERQVNLTPLHMQYEKPKGIEGKGENRLVVAFSQFTIADAKKMV 247

Query: 270 IELVEKNGGRHQTIRVENSDVVAAKVI 296
           I L E+NG R+  + V+   ++ A+ I
Sbjct: 248 IRLFEENGDRNPVLSVKGKHLLKARPI 274