Pairwise Alignments

Query, 268 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 553 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 66.6 bits (161), Expect = 1e-15
 Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 38/269 (14%)

Query: 5   GSQRSFP-SDREARLMKT-----RNGFV-PAYNVQSVVDSQHHLIGAMQVTDHPNDFEDL 57
           G + S+  +D +A  M+      RNG   P YN+Q  + +++  +   ++  +P D   L
Sbjct: 254 GERNSYSKTDPDATFMRMKEDAMRNGQTKPGYNLQ--IGTENQFLIDFRLFPNPTDTLTL 311

Query: 58  QPSIHAMQEDLQVEVSQAVADTGYANEEQILALEEEGKVIAVPFNEGDHSPKEDRE---- 113
            P  H+ ++      +  VAD+GY +EE    +++ G    V +N   +  KE R     
Sbjct: 312 IPFFHSFEQRYNRLPTVGVADSGYGSEENYRFMQDNGIEAFVKYN---YFHKEQRPRYTP 368

Query: 114 ---HGIFFTYDADNDYYIC----SQEKILPIKDRQVRKHGKIYRKYQGRDCKGCPLIKFC 166
              H     Y+A  DYY+C       +I   +D+    +     +Y+ + C+GCPL   C
Sbjct: 369 NPFHAESLHYNAGEDYYVCPMGQHMNRIGTRRDKTASGYITESARYKAQRCEGCPLCGSC 428

Query: 167 TTSKKGRII--------YRRADAEPIRQYMKKCKGMKYKALIRLRKTWVEHPFGTLKYWM 218
             ++  R+I        Y+R      R+ +   +G++++     R    E  FG +K+ M
Sbjct: 429 FKARGNRMIEVNHRLNQYKR----QARERLLSEEGIRHRG---RRCIEPEAVFGQMKHNM 481

Query: 219 GQIPLLLRGKEKVQAEIDLYATCYNLRRV 247
                   G++KV  +   +A  +N++++
Sbjct: 482 AYKRFRHVGEDKVTMDFAFFAIAFNIKKM 510