Pairwise Alignments

Query, 338 a.a., DNA primase (NCBI) from Bacteroides thetaiotaomicron VPI-5482

Subject, 308 a.a., antirestriction protein from Agrobacterium fabrum C58

 Score =  105 bits (263), Expect = 1e-27
 Identities = 90/293 (30%), Positives = 126/293 (43%), Gaps = 39/293 (13%)

Query: 28  WQKPWITIAANTRNFFPQNLTGRRYTGGNAFLLLFLCEKFQYQTPVFMTFNQAKEAGISV 87
           W +PW     + R   P    G+ YTG N  LL        + +  +MT  QA E G  V
Sbjct: 31  WVRPWSAANLSGRVSRPLRHNGQAYTGLNVLLLWSESVASGFMSSTWMTLRQANELGAHV 90

Query: 88  LKGSKSFPVYYFLFYVYHKETRKKITFEEYKALSREQQQEYNVIPTYKYYSVFNLDQTN- 146
            KG     V Y            + T  E  A   E +++   IP  K Y+VFN DQ + 
Sbjct: 91  RKGESGATVVY----------ASRFTKTEPDAGGGEVERD---IPFLKAYTVFNCDQIDG 137

Query: 147 FSD---VRPEEWEALREKFRGGQAEQPDGTTGEAHPEIDAMLEAKSWFCPIREQQGDRAF 203
            +D    RPE      E+     A++    TG                  +    GD+A+
Sbjct: 138 LADHYYSRPEPIAKPLERIE--HADRFFDNTGA-----------------VVRYGGDKAY 178

Query: 204 YSPLADYIVVPLRSQFVDMQSFYETLLHEMGHSTGHPTRLNRDLA-HPFGSEEYGKEELT 262
           YSP +D+I +P   QF DM SF  T  HE  H  G P RLNRDL+ +     E   EE+ 
Sbjct: 179 YSPASDHIQLPRPEQFRDMASFVATRAHETLHWAGGPARLNRDLSRYHKDRRERAFEEML 238

Query: 263 AEFAAALAGMFFGIAEHI--RTENAAYLKSWIKAIREEPKFILNVLADAMKIV 313
            E  AA+     GI   +  R ++AAY++SW + +  + + I N  A A + V
Sbjct: 239 VELGAAMICADLGIVPELEPRPDHAAYIQSWAEILGSDKRAIFNAAAHAQRAV 291