Pairwise Alignments

Query, 304 a.a., hydroxymethylglutaryl-CoA lyase from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 315 a.a., hydroxymethylglutaryl-CoA lyase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  201 bits (510), Expect = 2e-56
 Identities = 116/294 (39%), Positives = 163/294 (55%), Gaps = 6/294 (2%)

Query: 5   IQIVEVGPRDGLQNEKAVLEPAVRADLVRRLEQAGAKRIEAVSFVHPKYVPQMAGAEEVM 64
           + + E+GPRDGLQNE AV   A +  L+  L  AG KRIEA SFV PK+VPQMA + EV+
Sbjct: 21  VSLFEMGPRDGLQNEAAVPTQA-KVALIEALANAGVKRIEAGSFVSPKWVPQMADSGEVL 79

Query: 65  AALPHEAGRSRIGLVLNGKGYDRALATGVDEVNVSVAATDGFGLKNQGLAVKDQLAMLGE 124
             +  +AG     L  N KG + AL     EV +  AA+  F  +N   ++++ +     
Sbjct: 80  RQIRRQAGVVYSALTPNVKGLELALDAKASEVAIFGAASQSFSQRNINCSIEESIERFIP 139

Query: 125 IVARRHNAEASEGAPSLSAMISCVWGCPFDGEVSVDQVADMVGAIAEMGVGEIGLADTIG 184
           ++     A        +   +SCV GCP++GE++  +VA +   + +MG  EI L DTIG
Sbjct: 140 LMDMAKAANIP-----VRGYVSCVLGCPYEGEIAASEVARVSEILYKMGCYEISLGDTIG 194

Query: 185 AGDPWAVTKKVEAARAAAPDASLRLHFHDTRNTGLANAYAGVEAGIDVLDASVGGIGGCP 244
            G P    K ++A     P   L LHFHDT    LAN  A ++ G+   DASV G+GGCP
Sbjct: 195 VGTPLKARKMLQAVMERVPVEKLALHFHDTYGQALANITACLDLGVRSFDASVAGLGGCP 254

Query: 245 FAPGATGNIATEDLAYMLARGGFETGYDLDALIATARWIGEAIGRPAPSALSRA 298
           +A GA+GN+A+EDL YML   G +TG DL+ L      I + + R   S ++ A
Sbjct: 255 YAKGASGNLASEDLVYMLHGLGLKTGIDLEKLALAGFGISKQLNRLNGSKVANA 308