Pairwise Alignments

Query, 970 a.a., DNA polymerase I from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 914 a.a., DNA polymerase I from Pseudomonas stutzeri RCH2

 Score =  674 bits (1739), Expect = 0.0
 Identities = 406/959 (42%), Positives = 551/959 (57%), Gaps = 63/959 (6%)

Query: 25  LWMIDASAYIFRAYHALPPLTRKSDGLPVGAVQGYCNMLWKLLKDMKGADGPTHLVAIFD 84
           L ++D S+Y++RA+HALPPLT  S G P GAV+G  NML  L +     D P     +FD
Sbjct: 6   LILVDGSSYLYRAFHALPPLTT-STGKPTGAVKGVLNMLLSLRRQYP--DSP--FAVVFD 60

Query: 85  NSEKTFRNTLYDQYKAHRPPPPEDLVPQFPLVREATAAFGVHCVELPGYEADDLIATYAC 144
               TFR+ L++ YK+HRPP P+DL  Q   +  +  A G+  + + G EADD+I T A 
Sbjct: 61  AKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEADDVIGTLAR 120

Query: 145 KARDAGGEAVIVSSDKDLMQLIGGGVVMWDPMKDRRLAEPEVFEKFGVGPEKMVDLQALI 204
           +    G + VI + DKD+ QL+   V + + M         V  KFGVGPE ++D  AL+
Sbjct: 121 QCAALGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKTKFGVGPELIIDFLALM 180

Query: 205 GDSVDNVPGAPGIGPKTAAQLLDEY-GDLDTLLANAGEIKQPKRR------QTLIDFADQ 257
           GD VDN+PG PG+G KTA  LL+   G L  L  N  ++     R        L +  D 
Sbjct: 181 GDKVDNIPGVPGVGEKTACGLLNGIPGGLKGLYDNLDQVAGLPIRGAKSLGAKLAEHRDA 240

Query: 258 IRLSRELVRLTCDAPAPEAIDDFAVRDPDPAILSAFLETMEFRS-LQRRVGDGKAGPSDV 316
             +S EL  +  D P    + D    +P    L A    +EF++ L   + + KA   + 
Sbjct: 241 AFMSYELATIKIDVPLDVEVGDLMPGEPHREALIALYRELEFKNWLDDLLREAKAAGENC 300

Query: 317 SAFAPKRAPNLNAPVATPRYGQVVEGPAEVQTFDHAAYECVQTEEALDRWIARATEVGVV 376
                                +V      +Q    A YE +  +   +RW+ R       
Sbjct: 301 ---------------------EVQPEGCSIQA--EAQYETLLEQADFERWLDRLKTAECF 337

Query: 377 GFDTETDTLSATHAGLCGVSLAVGPNEACYIPLTHEH--EPQAGEGGLFGEAGETPEPIH 434
            FDTET ++ A  A L GVS A+ P +A Y+PL H +   PQ                  
Sbjct: 338 AFDTETTSIDAQRAELVGVSFAIEPGQAAYVPLRHSYMGVPQ------------------ 379

Query: 435 QLDKPTTLAKLKTLLEDPSVLKVLQNAKYDIAVMARRGIRVAPYD-DTMLMSYVLEGGLH 493
           QL+    LA LK LLEDP+  K+ Q+ KYD+ V+   GI +     DTML SYVL+    
Sbjct: 380 QLELDAVLAALKPLLEDPAKTKICQHGKYDMNVLMHYGIEMRGMTFDTMLESYVLDATAT 439

Query: 494 GHGMDELARLHLGHEPIPFKSVAGTGKSQKSFKHVALKPASEYAAEDADVTLRLWRILKP 553
            H MD LA  +LG   I F+ +AG G  Q +F  +A++ A  YAAEDADVTLRL + L  
Sbjct: 440 RHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAIEQAGPYAAEDADVTLRLHQTLLG 499

Query: 554 RLAR-EGLSTVYETLERSMPTVLADMELNGVRIDPDRLKRLSSEFGLRMAELEAQAHEIA 612
           +L +   L  V   +E  +  VLA +E NG  +D   L + S E G ++ +LE +A EIA
Sbjct: 500 KLEQTPSLLKVLTEIEMPLVPVLARIERNGALVDAQLLGQQSVELGDKLVQLEREAFEIA 559

Query: 613 GRPFNIGSPRQIGEILFGELNLPGGKKTASGQWGTDASVLEELA-LSHDLPRAILDWRQL 671
           G  FN+GSP+Q+  IL+ +L  P   KTA GQ  T  SVL ELA   + LP+ I+  R L
Sbjct: 560 GEEFNLGSPKQLCAILYDKLGCPVISKTAGGQPSTAESVLAELAEQDYPLPKVIMQHRSL 619

Query: 672 SKLKGTYTDALTAAADPKTDRVHTSYQLAAATTGRLASSDPNLQNIPIRTETGREIRQAF 731
           SKLKGTYTD L    +P+T R+HTSY  A   TGRL+SSDPNLQNIPIRT  GR IRQAF
Sbjct: 620 SKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSSDPNLQNIPIRTAEGRRIRQAF 679

Query: 732 IAAPGNVLISADYSQIELRLLAHIGDIPELKRAFKAGLDIHAATASEMFGVPVEGMPSET 791
           +AAPG  L++ADYSQIELR++AH+     L  AF+  LD+H ATA+E+FGVP+E + ++ 
Sbjct: 680 VAAPGYKLLAADYSQIELRIMAHLAQDAGLLHAFQNDLDVHRATAAEVFGVPLEQVSNDQ 739

Query: 792 RRRAKAINFGIVYGISAFGLANQLGIDQGEAGAYIKTYFERFPGIRAYMDKTKAEVRQTG 851
           RR AKAINFG++YG+SAFGLA Q+ + + EA  YI  YF R+PG+ AYM++T+ +  + G
Sbjct: 740 RRSAKAINFGLIYGMSAFGLAKQIDVGRKEAQEYIDRYFARYPGVLAYMERTRTQAAEQG 799

Query: 852 FVSTVFGRRIHIPAIHSKSGAERQFGERAAINAPIQGAAADIIRRAMIRMPAALTKAGLA 911
           +V T+FGRR+++P I+SK+GA R+  ER AINAP+QG AADII+RAMI +   L  +GL 
Sbjct: 800 YVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTAADIIKRAMIAVDGWLQDSGLD 859

Query: 912 TRMLLQVHDELVFEAPEAEADRAIAVIKRVMENASDPAVALTVPLVVDARAASNWDAAH 970
            R++LQVHDELV E  E   ++    I  +M  A+     L VPL+V+A   +NWD AH
Sbjct: 860 ARVILQVHDELVLEVREDLVEQVREAICPLMSGAAQ----LDVPLLVEAGVGNNWDEAH 914