Pairwise Alignments

Query, 970 a.a., DNA polymerase I from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 924 a.a., DNA polymerase A (NCBI) from Rhodospirillum rubrum S1H

 Score =  999 bits (2584), Expect = 0.0
 Identities = 539/952 (56%), Positives = 652/952 (68%), Gaps = 40/952 (4%)

Query: 25  LWMIDASAYIFRAYHALPPLTRKSDGLPVGAVQGYCNMLWKLLKDMKGADGPTHLVAIFD 84
           L+++D S YIFRAYH+LPP+TR +DG PV AV G+  ML KLL DM       HL  IFD
Sbjct: 7   LYLVDGSGYIFRAYHSLPPMTR-TDGTPVNAVYGFTAMLMKLLADMDA----DHLAVIFD 61

Query: 85  NSEKTFRNTLYDQYKAHRPPPPEDLVPQFPLVREATAAFGVHCVELPGYEADDLIATYAC 144
            +  +FRN +Y  YKA RPPPPEDL+PQFPL+REA  AF V C+E  G+EADDLIATYA 
Sbjct: 62  KARVSFRNEIYPLYKAQRPPPPEDLIPQFPLIREAVRAFNVPCIERDGFEADDLIATYAK 121

Query: 145 KARDAGGEAVIVSSDKDLMQLIGGGVVMWDPMKDRRLAEPEVFEKFGVGPEKMVDLQALI 204
           +AR  G    +VSSDKDLMQL+G GV ++DPMK+R +   EVFEKFGV P+K++D+QAL 
Sbjct: 122 RARAEGAIVTVVSSDKDLMQLVGEGVALFDPMKNRAIGPAEVFEKFGVAPDKVIDVQALA 181

Query: 205 GDSVDNVPGAPGIGPKTAAQLLDEYGDLDTLLANAGEIKQPKRRQTLIDFADQIRLSREL 264
           GD+VDNVPG PGIG KTAAQL+ EYGDL+TLLA A EIKQPKRRQ+L+D A+  R+S +L
Sbjct: 182 GDAVDNVPGVPGIGVKTAAQLIGEYGDLETLLARAAEIKQPKRRQSLLDHAEAARISLQL 241

Query: 265 VRLTCDAPAPEAIDDFAVRDPDPAILSAFLETMEFRSLQRRVGDGKAGPSDVSAFAPKRA 324
           VRL  D    E + DFA  +PD  +L+ FL    FRSL  RV          +A A  +A
Sbjct: 242 VRLRDDVEVSETLADFATAEPDAEVLAGFLAENGFRSLLARV----------TAVAHAKA 291

Query: 325 PNLNAPVATPRYGQVVEGPAEVQTFDHAAYECVQTEEALDRWIARATEVGVVGFDTETDT 384
                P A P                   Y  V T   L  WIA+A   G+V  DTETD+
Sbjct: 292 GTTPQPAAAPADDD---------------YVLVNTLAELGVWIAKARAAGLVAIDTETDS 336

Query: 385 LSATHAGLCGVSLAVGPNEACYIPLTHEHEPQAGEGGLFGEAGETPEPIHQLDKPTTLAK 444
           L A  A L GVSLA+ P  ACYIP  H      G        G  P   +  DK   LA 
Sbjct: 337 LKARRATLVGVSLAITPGRACYIPFAHGLRKAEG----LDFDGAAPPVANIEDKAAALAL 392

Query: 445 LKTLLEDPSVLKVLQNAKYDIAVMARRGIR-VAPYDDTMLMSYVLEGGLHGHGMDELARL 503
           L  LL DP VLKV  N K+D+ V+A  G+  VAP DDTM++SYVL+G LHGHGMDELA L
Sbjct: 393 LGDLLRDPGVLKVGHNLKFDLHVLANAGLSDVAPVDDTMVLSYVLDGTLHGHGMDELAGL 452

Query: 504 HLGHEPIPFKSVAGTGKSQKSFKHVALKPASEYAAEDADVTLRLWRILKPRLAREGLSTV 563
           HLG   I F+ V G GK Q +F  V L  A  YAAEDADVTLRL+ +L+ RL +E +  V
Sbjct: 453 HLGRRTITFEEVCGKGKGQITFDQVPLDKAVAYAAEDADVTLRLYLLLRDRLLKEHMVRV 512

Query: 564 YETLERSMPTVLADMELNGVRIDPDRLKRLSSEFGLRMAELEAQAHEIAGRPFNIGSPRQ 623
           +ETL+R M  +L DME  GVR+D  RLK LS +F  RM +LE Q H +AG  FN+ SP+Q
Sbjct: 513 HETLDRPMVRILTDMEAAGVRVDALRLKALSGDFAKRMGDLEDQIHALAGHAFNVASPKQ 572

Query: 624 IGEILFGELNLPGGKKTA-SGQWGTDASVLEELALS-HDLPRAILDWRQLSKLKGTYTDA 681
           +GE+LF E++L GGKK+  +G W TDA VL++LA   HDLP  +LDWRQ +KLKGTYTDA
Sbjct: 573 LGEVLFEEMSLTGGKKSRKTGAWSTDAQVLDQLAAEGHDLPARVLDWRQYAKLKGTYTDA 632

Query: 682 LTAAADPKTDRVHTSYQLAAATTGRLASSDPNLQNIPIRTETGREIRQAFIAAPGNVLIS 741
           L A  D +T RVHT+Y L    TGRL+S+DPNLQNIP+R+E GR+IR+AFIAAPG++LIS
Sbjct: 633 LVAEIDERTGRVHTTYGLTVTATGRLSSNDPNLQNIPVRSEAGRKIREAFIAAPGHLLIS 692

Query: 742 ADYSQIELRLLAHIGDIPELKRAFKAGLDIHAATASEMFGVPVEGMPSETRRRAKAINFG 801
           ADYSQIELRL+AH+  I  L++AF  G DIHA TAS++FGVPVEGM    RR+AKAINFG
Sbjct: 693 ADYSQIELRLVAHVAGITALRQAFAEGKDIHAITASQVFGVPVEGMDPMVRRQAKAINFG 752

Query: 802 IVYGISAFGLANQLGIDQGEAGAYIKTYFERFPGIRAYMDKTKAEVRQTGFVSTVFGRRI 861
           I+YGISA GLA QLG+ + EA A+I  YF RFP IR+YM+  K E R  G+V+T FGRRI
Sbjct: 753 IIYGISAHGLAQQLGVGRPEAAAFITAYFARFPEIRSYMETVKEEARTVGWVATPFGRRI 812

Query: 862 HIPAIHSKSGAERQFGERAAINAPIQGAAADIIRRAMIRMPAALTKAGLATRMLLQVHDE 921
            IP I  K+ A R F ER AINAPIQG AADII+RAMI +P AL +AGLATRMLLQVHDE
Sbjct: 813 PIPGIQDKNPAARAFAERQAINAPIQGGAADIIKRAMIALPPALEQAGLATRMLLQVHDE 872

Query: 922 LVFEAPEAEADRAIAVIKRVMENA---SDPAVALTVPLVVDARAASNWDAAH 970
           L+FEAPEAEA+ A A++KRVME A   +D     TVPL VD   A++W  AH
Sbjct: 873 LIFEAPEAEAETAAALVKRVMETAVTLTDDQGERTVPLEVDTGIAASWAEAH 924