Pairwise Alignments

Query, 276 a.a., shikimate dehydrogenase from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 287 a.a., shikimate 5-dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  110 bits (276), Expect = 3e-29
 Identities = 90/263 (34%), Positives = 132/263 (50%), Gaps = 22/263 (8%)

Query: 15  IAGNPVAHSLSPVIHNAWLAAGVIDGAYVPF-APADAAGFESLVAAGRAGLIMGLNVTAP 73
           + G+P+ HS SP IH  + A       Y    AP D  GFE+ + +  +    G NVT P
Sbjct: 13  VFGHPIGHSKSPFIHGQFAALTQESLTYEAILAPID--GFEASLKSFFSSGGKGANVTVP 70

Query: 74  FKEQAFALADQATAAARLTSSANILQ-FENGRVLADSSDGIGLMSGLKEQAPDLDVAGRP 132
           FKEQAFAL D  +A A L  + N L    +G +  D++DG+GL++ L      L    + 
Sbjct: 71  FKEQAFALCDSLSAEAALAGAVNTLSLLADGSIRGDNTDGLGLVADLISHLGSLQ--HKR 128

Query: 133 VVMLGAGGAARAGSGALVEAG-AEVRIVNRSPERAQALAADLG--------PSVRVMAAG 183
           V+++GAGGAAR     L+ AG  ++ I NR+  +A+ L               ++ ++  
Sbjct: 129 VLLVGAGGAARGCILPLLNAGVGQLVITNRTQTKAKDLVDIFSQLEEGIYKDKLQALSMS 188

Query: 184 DAFDGAALVINALSVA-----PSIDFDRIAPGTVVMDMTYKPLATPFLTAARERG-LRTV 237
           +      LVIN+ S +     P +    I   TV  DM Y  + T F   A ++G  + +
Sbjct: 189 ELTGEFELVINSTSASLAGELPPLPQSIIGSTTVCYDMMYGAMPTAFNQWALQQGAAKVI 248

Query: 238 DGLAMLIGQAAPSFEALFRRAPP 260
           DGL ML+GQAA SF AL+R   P
Sbjct: 249 DGLGMLVGQAAKSF-ALWRTVEP 270