Pairwise Alignments

Query, 400 a.a., molecular chaperone DnaJ from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 374 a.a., chaperone protein DnaJ (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  336 bits (861), Expect = 8e-97
 Identities = 172/361 (47%), Positives = 227/361 (62%), Gaps = 17/361 (4%)

Query: 3   RDYYEVLGVERTIDAPGLKAAYRKLAMIHHPDRNGGSEESMAKFKELSEAYTVLSDDNKR 62
           RDYYEVLGV R      +K  YRKLA+ +HPDRN  + E+   FKE +EAY VL D +KR
Sbjct: 4   RDYYEVLGVARDASEDEIKRQYRKLALQYHPDRNPDNPEAEQMFKEAAEAYDVLRDADKR 63

Query: 63  AAYDRYGHAGVNGGGGGNPFGQGGQGFSDINDIFSQVFGDAFGDAFGGRQGRGQQGGPR- 121
           A YDR+GHAG+NG GGG+       GF++ +D+F+  F D FGD FG   G  +  GPR 
Sbjct: 64  ARYDRFGHAGLNGNGGGH-------GFANADDVFAH-FSDIFGDLFGFATGSSRMRGPRP 115

Query: 122 -RGSDLRYDLEITLEQAYKGEDVEIDIPSTMTCDTCEGSGAKPGTKPVTCTTCQGAGRVR 180
             G+DLRY+L I+  QA KG++V + +P  +TCD C GSGA  GTKP TC  C G G++R
Sbjct: 116 QAGADLRYNLSISFRQAAKGDEVTLRLPKKVTCDECNGSGAAAGTKPETCRHCGGNGQIR 175

Query: 181 QANGFFQVERTCPRCHGQGQMIADPCTTCHGHGQVRKTRTLNLKIPAGVDDGSRIRLSGE 240
           Q+ GFFQ+   CP C G+GQ+I  PC  C G G +++ R L ++IPAGVD G+R+RL GE
Sbjct: 176 QSQGFFQIAVPCPVCRGEGQVIPTPCPKCKGSGILQQVRELAVRIPAGVDTGNRLRLRGE 235

Query: 241 GDAGQRGGPRGDLYVFISVTPHDLFERDNLDLLVTVPVPMTVAALGGEIDAPCLVSTACD 300
           G+ G  GGP GDLYV +SV     F R   DL++T  V    AALG  I+ P L      
Sbjct: 236 GEPGLHGGPPGDLYVVVSVEQDKTFRRQGQDLVITHEVSFVQAALGDRIEVPTLDD---- 291

Query: 301 GKCKASVAVPAGAQTGKTVRIKGKGMPHLNGRNRGDLVVELFVETPTDLTARQRELLEEL 360
                ++ +P G Q+G+  R+  +G+P+L    +GDL+VE+ V TP  LT +Q ELL E 
Sbjct: 292 ---PVTLDIPKGTQSGEVFRLTDQGLPYLGHHQKGDLLVEVRVLTPVSLTKKQEELLREF 348

Query: 361 A 361
           A
Sbjct: 349 A 349