Pairwise Alignments

Query, 212 a.a., TIM44-related membrane protein TimA from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 215 a.a., Uncharacterized protein conserved in bacteria from Sphingomonas koreensis DSMZ 15582

 Score =  109 bits (272), Expect = 4e-29
 Identities = 73/218 (33%), Positives = 107/218 (49%), Gaps = 16/218 (7%)

Query: 5   FQVVVFAFIAAFVLFQLYNVLGKRVGRQPQEDAKIA------PPGPAQAETPKIA----- 53
           + VV+FA IAAF+  +LY+VLGKR G + Q   + A      PP P   + P        
Sbjct: 2   YLVVLFAAIAAFLALRLYSVLGKRTGHEQQPLPRAADERVGVPPMPRTIDIPAEVRDAGP 61

Query: 54  -AIDPATLASIASLKARDPAFDPARFLDGARQAYETIVRGYAAGDRAALKPLLKPNVFAS 112
             ++P     + +L A DP+FD A+F++G + AY  I+  +  GDR  L  L++ +V  S
Sbjct: 62  RTVEPGAEGGLRALVAADPSFDVAQFVEGGKSAYRMILEAFWKGDRDTLSWLVEDSVRDS 121

Query: 113 FEAGIAARETRGETETVEFLYPPRADLEGAVAEGDKAVAKVRFLAELRSRVTKASGETAD 172
           F A I ARE  GET     +   RA +     EG  A   +RF A++ +      G    
Sbjct: 122 FVAAIDAREAAGETLDNRLISIERAVIAEIAVEGRVARVTMRFDADIAAVTRDKDGNVIA 181

Query: 173 ATTGEPLVEERRTAEHWTFERTLGAADPNWVLARVEPA 210
            +    L +   T + WTF R L + DPNW L+  + A
Sbjct: 182 GS----LTDAVDTHDVWTFSRDLRSDDPNWKLSDTDEA 215