Pairwise Alignments

Query, 278 a.a., tetratricopeptide repeat protein from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 359 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 55/212 (25%), Positives = 83/212 (39%)

Query: 21  ALAADPTAATAAQARAPSSAAVRATYDRMDALSRSVFWASEQQADPTDAVAGVKLAQALR 80
           AL+ +   A  +Q  A +  A  A  +  +  +   ++    + D   A A   LA   +
Sbjct: 92  ALSFERAIAMDSQTAAFAFGAATAYANLGEYAAAERYYEQSLRLDNKRAEAYRGLATVQQ 151

Query: 81  ELGRYDQAAEAAQATLTIQPNNLDALLELGRAHIARGQAFYGVAPLEQARDLAPRDWRPY 140
             G    A    Q    ++PNN     E+G+ ++ + Q    +  L+ A  LAPR+   Y
Sbjct: 152 RRGNLVGAINTYQRWQQLEPNNWQPRNEMGKIYLQQRQFTNALQVLQAATRLAPREADIY 211

Query: 141 SLLGVAYEQVRRTDDARAAWNQALALSPDNPDVLTNAATAALTHGDAPGAETLLRRAVAQ 200
           S L +A   +     A  +   +++L P NP  L  A    L  GD   A    RRA   
Sbjct: 212 SNLAIAQLGLNNPRAALTSLQSSISLDPRNPRTLLKAGDIYLVLGDREAANRNYRRAFEL 271

Query: 201 PTASAKVRQNLAMVLGLQGKMGEAEQILRREL 232
              SAK       +L  QG    A   LR  L
Sbjct: 272 NRNSAKTLDRYTQILLDQGDATLATVYLRDAL 303



 Score = 28.9 bits (63), Expect = 2e-04
 Identities = 40/158 (25%), Positives = 58/158 (36%), Gaps = 18/158 (11%)

Query: 66  PTDAVAGVKLAQALRELGRYDQAAEAAQATLTIQPNNLDALLELGRAHIARGQAFYGVAP 125
           P +A     LA A   L     A  + Q+++++ P N   LL+ G  ++  G        
Sbjct: 205 PREADIYSNLAIAQLGLNNPRAALTSLQSSISLDPRNPRTLLKAGDIYLVLGDREAANRN 264

Query: 126 LEQARDLAPRDWRPYSLLGVAYEQVRRTD-DARAAW---NQALALSPDNPDVLTNAATAA 181
             +A +L     +        Y Q+     DA  A      AL L P NPD       A 
Sbjct: 265 YRRAFELNRNSAKTLD----RYTQILLDQGDATLATVYLRDALRLEPRNPDFHLRLGLAY 320

Query: 182 LTHGDAPGAETLLRRAV----------AQPTASAKVRQ 209
           L  G  P A + L +A            Q  A+A +RQ
Sbjct: 321 LARGLKPEARSSLNQAALLYQQRGDSNGQQQAAAALRQ 358



 Score = 26.9 bits (58), Expect = 6e-04
 Identities = 26/108 (24%), Positives = 41/108 (37%)

Query: 65  DPTDAVAGVKLAQALRELGRYDQAAEAAQATLTIQPNNLDALLELGRAHIARGQAFYGVA 124
           DP +    +K       LG  + A    +    +  N+   L    +  + +G A     
Sbjct: 238 DPRNPRTLLKAGDIYLVLGDREAANRNYRRAFELNRNSAKTLDRYTQILLDQGDATLATV 297

Query: 125 PLEQARDLAPRDWRPYSLLGVAYEQVRRTDDARAAWNQALALSPDNPD 172
            L  A  L PR+   +  LG+AY       +AR++ NQA  L     D
Sbjct: 298 YLRDALRLEPRNPDFHLRLGLAYLARGLKPEARSSLNQAALLYQQRGD 345