Pairwise Alignments

Query, 278 a.a., tetratricopeptide repeat protein from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 287 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 2/140 (1%)

Query: 62  QQADPTDAVAGVKLAQALRELGRYDQAAEAAQATLTIQPNNLDALLELGRAHIARGQAFY 121
           Q+  P +      L  A    G Y +AA   Q  L I+P++  AL +LG  ++ + Q   
Sbjct: 103 QKLSPREPAILFALGSARFRQGNYSEAASFLQRGLAIKPDSSGALFDLGNVYLIQKQYPP 162

Query: 122 GVAPLEQARDLAPRDWRPYSLLG-VAYEQVRRTDDARAAWNQALALSPDNPDVLTNAATA 180
            +A  ++A  + P  W   + LG V+YEQ  R + A   WN+A+ LS D  + +   A  
Sbjct: 163 AIAAFQKAVQVKPDFWEAINNLGLVSYEQGDR-NQALNYWNRAIELSKDAAEPVLAKAVL 221

Query: 181 ALTHGDAPGAETLLRRAVAQ 200
               G    A  L ++A+ +
Sbjct: 222 VYQQGQTEEAVRLAQQALGK 241



 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 8/253 (3%)

Query: 6   ALLATVALIALSGT---PALAADPTAATAAQARAPSSAAVRATYDRMDALSRSVFWASEQ 62
           ALLA +A ++ SGT   PA A  P               V A         + + +A  Q
Sbjct: 5   ALLALLAALSCSGTAFSPAQAFTPYVPDLDSKYLEEQGLVLAQEAAQLLQFQQIEFAQRQ 64

Query: 63  -----QADPTDAVAGVKLAQALRELGRYDQAAEAAQATLTIQPNNLDALLELGRAHIARG 117
                Q  P D    + LA A   L + D A  A +    + P     L  LG A   +G
Sbjct: 65  AALATQLAPNDFRVWLVLADASLRLNQLDPAIAALEKAQKLSPREPAILFALGSARFRQG 124

Query: 118 QAFYGVAPLEQARDLAPRDWRPYSLLGVAYEQVRRTDDARAAWNQALALSPDNPDVLTNA 177
                 + L++   + P        LG  Y   ++   A AA+ +A+ + PD  + + N 
Sbjct: 125 NYSEAASFLQRGLAIKPDSSGALFDLGNVYLIQKQYPPAIAAFQKAVQVKPDFWEAINNL 184

Query: 178 ATAALTHGDAPGAETLLRRAVAQPTASAKVRQNLAMVLGLQGKMGEAEQILRRELPPEQA 237
              +   GD   A     RA+     +A+     A+++  QG+  EA ++ ++ L  +  
Sbjct: 185 GLVSYEQGDRNQALNYWNRAIELSKDAAEPVLAKAVLVYQQGQTEEAVRLAQQALGKDSQ 244

Query: 238 EQNLQWLRSRSTG 250
             +L +L+ +  G
Sbjct: 245 YVSLDFLKEQLWG 257