Pairwise Alignments

Query, 386 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 367 a.a., radical SAM enzyme, Cfr family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  257 bits (657), Expect = 3e-73
 Identities = 147/342 (42%), Positives = 203/342 (59%), Gaps = 8/342 (2%)

Query: 46  KMRASQVWSWIHHYGVTEFSAMSNVAKDMQAKLAEHFTLARPEVVERQVSKDGTRKWLIR 105
           + RA QVW W+       F AM+NV+K  +A+LAE   +  PEV   + S DGT K+L+ 
Sbjct: 24  RFRARQVWQWLWQKNARSFDAMTNVSKATRARLAEAARITWPEVRTVKTSSDGTVKFLLA 83

Query: 106 TAPGIEIETVYIPDVGRAGAL----CVSSQVGCTLNCTFCHTGTQKLVRNLTAAEIVAQV 161
            A G  +ETV IP   R G +    C+S QVGC + CTFC TG+    RN+T AEI+ QV
Sbjct: 84  LADGALVETVLIPSESREGKVRMTQCLSCQVGCAMGCTFCSTGSMGFERNMTMAEILGQV 143

Query: 162 QVARDDLEEWPSPKEDRRLSNIVFMGMGEPLYNLDHVADAIDIISDNEGIALSRRRITVS 221
            VAR+ L +     +   + N+VFMGMGEPL NL+ V  ++  ++D  G+  S RRITVS
Sbjct: 144 LVAREHLGD--DRPDHPIVRNLVFMGMGEPLLNLNEVMRSLRTLNDEFGLCFSPRRITVS 201

Query: 222 TSGVVPQLQALGDRTAAMLAISLHATNDALRDVLVPLNKKYPLDQLMAAIRAYPGLSNAR 281
           T G+   L+ LG+   A LA+SLHA N  +R  ++P   ++ LD LMAA+ +YP L    
Sbjct: 202 TCGIEKGLRELGESGLAFLAVSLHAPNQEVRARIMPRAARWTLDDLMAALESYP-LKTRE 260

Query: 282 RVTFEYVMLKGVNDSPEEARALLKLIEGIPAKINLIPFNPWPGVEYECSDWKTIERFAAI 341
           R+TFEY++L GVNDS + AR L++L+    AK+NLI +NP  G+ YE      I  F   
Sbjct: 261 RITFEYLLLGGVNDSIDHARELVRLVSRTKAKLNLIVYNPAEGLPYEAPSQARILAFEQY 320

Query: 342 LNKAGYASPIRTPRGRDILAACGQLKSESEKVRASALRKAEQ 383
           L      + IR  +G+DI AACGQLK+ SE    + +   E+
Sbjct: 321 LWSKNVTAIIRKSKGQDIKAACGQLKA-SELAELAGMAVTEE 361