Pairwise Alignments

Query, 386 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 373 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  308 bits (789), Expect = 2e-88
 Identities = 170/352 (48%), Positives = 220/352 (62%), Gaps = 9/352 (2%)

Query: 20  VNLSGLTRAGLRQALIDANVCPPEKAKMRASQVWSWIHHYGVTEFSAMSNVAKDMQAKLA 79
           +NL  L R  +R    D    P      RA Q+  WI+H+GV++F  M+N+ K ++ KLA
Sbjct: 6   INLLDLDRKAMRALFADLGEKP-----FRADQLMKWIYHFGVSDFEEMTNINKVLRQKLA 60

Query: 80  EHFTLARPEVVERQVSKDGTRKWLIRTAPGIEIETVYIPDVGRAGALCVSSQVGCTLNCT 139
               +  PE+   Q S DGT K+ I    G E+ETVYIP+  RA  LCVSSQVGC L CT
Sbjct: 61  ARCEIVAPEISSYQKSTDGTIKFAIHVGEGQEVETVYIPEDDRA-TLCVSSQVGCALECT 119

Query: 140 FCHTGTQKLVRNLTAAEIVAQVQVARDDLEEWPSPKEDRRLSNIVFMGMGEPLYNLDHVA 199
           FC T  Q   RNLT +EIV Q+      L  +     +R ++N+V MGMGEPL NL +V 
Sbjct: 120 FCSTAQQGFNRNLTVSEIVGQIWRVSHFLG-FAKETGERPITNVVMMGMGEPLLNLANVI 178

Query: 200 DAIDIISDNEGIALSRRRITVSTSGVVPQLQALGDRTAAMLAISLHATNDALRDVLVPLN 259
            A+DI+ D+ G +LS+RR+T+STSGVVP L  LGD     LA+S+HA ND LRD+LVP+N
Sbjct: 179 PAMDIMLDDFGFSLSKRRVTLSTSGVVPALDKLGDALDVALAVSIHAPNDELRDILVPVN 238

Query: 260 KKYPLDQLMAAIRAYPGLSNAR--RVTFEYVMLKGVNDSPEEARALLKLIEGIPAKINLI 317
           KKYPL + +A IR Y   SNA   RVT EYVML  +NDS E+A  L +L++  P K+NLI
Sbjct: 239 KKYPLQEFLAGIRRYIAKSNANRGRVTVEYVMLDHINDSTEQAHELAQLMKDTPCKVNLI 298

Query: 318 PFNPWPGVEYECSDWKTIERFAAILNKAGYASPIRTPRGRDILAACGQLKSE 369
           PFNP+PG  Y  S    I+RF+ +L + G    +R  RG DI AACGQL  +
Sbjct: 299 PFNPYPGSPYGRSSNSRIDRFSKVLMEYGLTVIVRKTRGDDIDAACGQLAGD 350