Pairwise Alignments

Query, 725 a.a., primosomal protein N' from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 735 a.a., primosomal protein N' (RefSeq) from Shewanella amazonensis SB2B

 Score =  374 bits (961), Expect = e-108
 Identities = 257/746 (34%), Positives = 374/746 (50%), Gaps = 47/746 (6%)

Query: 6   VLIPLPVPEAFDYEVPEALSLAHGDLARGDQVAVPLGPRLIRGVVSEVFETTG-SNRRLK 64
           V +P+P+  ++ Y +P   S +      G +V VP G + + G+++   ++    + ++K
Sbjct: 11  VALPVPMRRSYSYRLPAQPSTSP---CPGKRVKVPFGKQQLIGLITATKDSCELPDAQIK 67

Query: 65  AIDSVLDDPP-LPAGVMDFVEWAGRWTLSAPGEMAATAL-----KGL-RAPRPRP----E 113
            I  ++DD P L   +     WA R+   + G+M   AL     KG   AP+ R      
Sbjct: 68  EIIEIIDDEPALSEPLYKLTLWAARYYFCSQGQMLTQALPVALRKGADAAPKSRTWLKLT 127

Query: 114 RRVRRVGERSPSRATPARTGVLETLCDRAMPPADLARAAGVSSGVVKGLIDEGVLEIIEI 173
            + R  G  +  RA PA+  + E L    +   D   A  +S   +KGL D+  ++  ++
Sbjct: 128 DKAREAGITTLKRA-PAQQKLAEMLWQHPLS-LDEFNAMELSKAALKGLEDKDWVQREQV 185

Query: 174 AAEAAFD---RPDPDHAPAALNGDQAASATAMAEGVAGGGFRPFLLDGVTGSGKTEAYLE 230
             +         +    P  LN +QA +  A+    A  G+   LL+G+TGSGKTE YL 
Sbjct: 186 PVDINLGWRTALELGETPHKLNKEQAVAVAAIN---AAEGYACALLEGITGSGKTEVYLS 242

Query: 231 AIARVLRADAAAQILILLPEIALTQALIERIAARFGAAPAEWHSGVAPPRRRQVWEAVVA 290
            + ++L      Q LIL+PEI LT   I+R   RF    A  HS +   +R   W A  +
Sbjct: 243 VLEKIL--SEGKQALILVPEIGLTPQTIDRFRRRFKVEVAVIHSNLTDNQRLDAWRAGRS 300

Query: 291 GRCNIVVGARSALFLPFTNLRLIVVDEEHDGSFKQEEGLVYHGRDLAVARARIEGAAVVL 350
           G   I++G RSALF P     +I++DEEHD SFKQ+EG+ YH RDLAV R  +E   VVL
Sbjct: 301 GEAAIIIGTRSALFTPMAFPGIIILDEEHDSSFKQQEGVGYHARDLAVMRGHLENIPVVL 360

Query: 351 ASATPSLETLWNAQSGRYDWLKLGARHGTAVLPDIALLDLRQNTPDPQTWLSQPLRLAIG 410
            SATPSLE+L NA SGRY  L LG R G A      ++D+R          +QPL+  + 
Sbjct: 361 GSATPSLESLQNALSGRYRHLHLGERAGNAKKVRQGIIDIR----------NQPLKAGMS 410

Query: 411 ETLLR--------GEQTLLFLNRRGYAPVVLCRACGHRLTAPDTDSWLVEHRYTGRLVCH 462
             LL         G Q LLFLNRRG+AP +LC  CGH       D++   H+  G + CH
Sbjct: 411 AALLNEMRLHLDAGNQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQKLGEIRCH 470

Query: 463 LTGFSMARPKLCPSCGAEDSLVSVGPGVERVEEEVRQLFPEARTAVFSSDTAPDARSARA 522
             G   A P+ C +CG+   L+  G G E++E+ +++ FP+        DT     S   
Sbjct: 471 HCGNQYAIPRQCHNCGS-TMLMGQGIGTEQLEQVLKEEFPKYPVVRIDRDTTRLKGSLEN 529

Query: 523 LIQRMTDGEIDILVATQAAAKGHNFPRLTLVGVVDADLGLRGGDLRAAERTYQLLAQATG 582
            +Q +  G+  ILV TQ  AKGH+FP +TLVG++D D  L   D RA ER  QL  Q  G
Sbjct: 530 HLQAIHRGDYKILVGTQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAG 589

Query: 583 RAGRADRPGRALLQTWTPEHPVLMALAAGDRDAFVEAEMAEREAASLPPYGRLAAIILSS 642
           RAGRA +PG  LLQT   ++P+L  L       F   +++ER+ A+LPP   +      +
Sbjct: 590 RAGRAAKPGTVLLQTHQSDNPILRELMHKGYGDFARGQLSERKQAALPPAWHMVLARAEA 649

Query: 643 ENAAAVEKTANDLAQAIPNAERLEVYGPADAPLALVRGRRRKRLLVRADRDVNLQAFLRA 702
             A   E     +A  +P     EV GP  AP+    G+ R++L+ +A++   LQ  L A
Sbjct: 650 HRAEDAEAFLAAIAAMLPRDRGFEVIGPLPAPMDRKAGKHRRQLMFQAEQRQGLQQALEA 709

Query: 703 WLQRVKV---PGSVRLTVDVDPYSFL 725
            L  + +       R ++D DP   L
Sbjct: 710 ILPAIDLLPEAKRCRWSLDRDPQDLL 735