Pairwise Alignments

Query, 383 a.a., efflux RND transporter periplasmic adaptor subunit from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 398 a.a., RND transporter from Azospirillum brasilense Sp245

 Score =  124 bits (311), Expect = 5e-33
 Identities = 107/341 (31%), Positives = 162/341 (47%), Gaps = 32/341 (9%)

Query: 44  VTAATVTQINLARTVSASGSVSAWEEVPVAAETGGLTAVAVYVDEGSYVRQGQPLVQMND 103
           V+ A  T  ++ +  +A G+++A  +V VA E  G     ++ + G+ V+ G+PLVQ+ND
Sbjct: 69  VSVAEATAQSVPKYTTAIGTLTASRQVTVAPEVVG-RVTQIFFESGARVKAGEPLVQLND 127

Query: 104 VLLRAQLRQQQAQVQLAEANVARDNAALDRAQQLKERGFLSQASLDTALANQRSSNANLA 163
              +A L   +AQ +LAE N       L RA+ L       Q ++D   A    +NAN+ 
Sbjct: 128 ATEQADLLAFRAQAKLAENN-------LQRARNLLRNQAGPQVTVDQNQAQLDEANANI- 179

Query: 164 AARAALSQTQTQLSQATIRAPVGGMIISRSVTKGQIIAAGTELFRMVRDGRLELDAQVPE 223
                  +T+  ++Q  IRAP  G +  R V  G+ ++AG  +  +     L +D  +PE
Sbjct: 180 ------KKTEALIAQKLIRAPFDGELGIRQVNVGEYVSAGGPVVTLTDLSNLFVDFTLPE 233

Query: 224 TELSLVRAGQSAIVTSSEAGQTT--GSVRIVTPEVNAQTRLGLARISLA-PGAQLRPGMF 280
             LS +R  Q  ++++  A   T    +  + P+V+  TR    R +L  P  +L PGMF
Sbjct: 234 QALSQIRIRQPVLISADAAPGATFDAVISTIEPQVSPDTRAIKVRATLQNPERKLLPGMF 293

Query: 281 ARAEIAVGDQPA---LVVPSSAVVYREAKAGVYVVG--------QGDVVRFVPVTTGVRS 329
             A I V   PA   +V+P +AV Y      V+VV          G V   VPV TG R 
Sbjct: 294 --ANIRVVQPPAANRIVIPETAVDYTVYGDSVFVVAAQKDGEGKDGHVANRVPVKTGDRF 351

Query: 330 GDRVAV-TGVQAGQRVVVQGAGFLGEGDHVTVAPATAAPQP 369
             +V +  GV+ G RVV  G   L  G  V    A+A   P
Sbjct: 352 DGKVEILDGVKPGDRVVSSGQLKLNNGAAVVPTEASALVPP 392