Pairwise Alignments

Query, 383 a.a., efflux RND transporter periplasmic adaptor subunit from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 363 a.a., RND family efflux transporter, MFP subunit from Sphingomonas koreensis DSMZ 15582

 Score =  154 bits (389), Expect = 4e-42
 Identities = 119/361 (32%), Positives = 174/361 (48%), Gaps = 24/361 (6%)

Query: 20  LLAGCGGGDDKKAHGKEAAGARQTVTAATVTQINLARTVSASGSVSAWEEVPVAAETGGL 79
           LLA CGG D     G+EA      VT A V        + A G+  A E+V + A     
Sbjct: 13  LLAACGGNDAALKKGREAP----LVTLAAVQPARFVERIDAVGTARANEQVTLTAPVTQ- 67

Query: 80  TAVAVYVDEGSYVRQGQPLVQMNDVLLRAQLRQQQAQVQLAEANVARDNAALDRAQQLKE 139
             V +  D+G+YV +GQ +  +      AQL Q QA+ + A          L+R + LK 
Sbjct: 68  RIVRLNFDDGAYVAKGQVIAVLETATQSAQLAQAQARAREAHQQ-------LERLEALKA 120

Query: 140 RGFLSQASLDTALANQRSSNANLAAARAALSQTQTQLSQATIRAPVGGMIISRSVTKGQI 199
           RGF +++++DT +A    +NA  A ARA ++          +RAP GG +  R+++ G +
Sbjct: 121 RGFATRSAVDTQVALAGQANAQAAEARAGINDR-------VVRAPFGGWVSLRNISAGAV 173

Query: 200 IAAGTELFRMVRDGRLELDAQVPETELSLVRAGQS--AIVTSSEAGQTTGSVRIVTPEVN 257
           + AGTE+  +    R++LD  VPET L+ ++ GQ   A+  +       G+V  V P +N
Sbjct: 174 VTAGTEIVTVSDVSRIKLDFPVPETLLAQLKPGQPIVAVAAAYPDQPFRGTVDTVDPVLN 233

Query: 258 AQTRLGLARISLAPG-AQLRPGMFARAEIAVGDQPALVVPSSAVVYREAKAGVYVVGQGD 316
            QTR    R  LA G  +L+PGM     I   ++    VP  A+V       V+ V  G 
Sbjct: 234 PQTRATTVRAVLANGDRRLKPGMLLTVTIESAERTVPAVPELALVGEGENMFVFTVENGK 293

Query: 317 VVRFVPVTTGVRSGDRV-AVTGVQAGQRVVVQGAGFLGEGDHVTVAPATAAPQPAAPAAP 375
             R V V TG+R    V  V G++AGQRVV +G   + +G  V    A  A   +  AA 
Sbjct: 294 AKR-VQVRTGLRQNGMVEIVDGLRAGQRVVTEGVVKIADGQAVRTGAADNAKGRSGAAAK 352

Query: 376 A 376
           A
Sbjct: 353 A 353