Pairwise Alignments

Query, 383 a.a., efflux RND transporter periplasmic adaptor subunit from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 402 a.a., RND family efflux transporter, MFP subunit from Sphingomonas koreensis DSMZ 15582

 Score =  172 bits (435), Expect = 2e-47
 Identities = 122/364 (33%), Positives = 190/364 (52%), Gaps = 14/364 (3%)

Query: 9   LLAGAAVLAVL------LLAGCGGGDDKKAHGKEAAG---ARQ--TVTAATVTQINLART 57
           ++ G   LAVL        +G   G+   A  K A G    RQ   V+ A   +  + R 
Sbjct: 30  IIGGLIALAVLAGAWFAFASGKADGEKSAAAAKGAGGEGGGRQLPVVSVAVPGRQEVDRV 89

Query: 58  VSASGSVSAWEEVPVAAETGGLTAVAVYVDEGSYVRQGQPLVQMNDVLLRAQLRQQQAQV 117
           +S +GS++A  E+PV     G     V V+ G +V  GQ L  ++  +     + Q A +
Sbjct: 90  ISGTGSLAARREMPVGVAGEGGEVTRVLVEPGDWVAAGQVLATVDRSVQSQTAQSQAANI 149

Query: 118 QLAEANVARDNAALDRAQQLKERGFLSQASLDTALANQRSSNANLAAARAALSQTQTQLS 177
           ++A+A++    A LDRA+QL  RGF+S+A +D   A + ++ A +  A+A  S+T  +  
Sbjct: 150 RVAQADLGIAQAELDRAKQLVARGFVSKADIDRKTATRDAAAARVRVAQAQHSETAARNR 209

Query: 178 QATIRAPVGGMIISRSVTKGQIIAAGT-ELFRMVRDGRLELDAQVPETELSLVRAGQSAI 236
           +  IR+P  G++++R+V  GQI++AG+  LFR+ + G+ E+  Q+ E +L  V  G    
Sbjct: 210 RLDIRSPAAGLVLTRTVEPGQIVSAGSGTLFRVAQGGQFEMRVQLSEADLQRVPVGARVD 269

Query: 237 VTS-SEAGQTTGSVRIVTPEVNAQTRLGLARISLAPGAQLRPGMFARAEIAVGDQPALVV 295
           VT    A +  G V  V+P ++ QTR G+AR++L     LRPG FA A I  G + A ++
Sbjct: 270 VTPVGTAEKFAGQVWQVSPVIDPQTRQGIARVALPYNKALRPGGFASASIHSGGEVAPML 329

Query: 296 PSSAVVYREAKAGVYVVGQGDVVRFVPVTTGVRSGDRVAVT-GVQAGQRVVVQGAGFLGE 354
           P SA+        VYV+   D      +TTG  S   VA+T G+Q  +RVV+    FL  
Sbjct: 330 PQSAIQSDSKGNFVYVLNAKDEAERRAITTGDVSDAGVAITSGLQGTERVVLTAGAFLNP 389

Query: 355 GDHV 358
           G  V
Sbjct: 390 GQKV 393