Pairwise Alignments

Query, 269 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 272 a.a., ribosomal RNA small subunit methyltransferase A from Sphingomonas koreensis DSMZ 15582

 Score =  269 bits (687), Expect = 5e-77
 Identities = 150/272 (55%), Positives = 186/272 (68%), Gaps = 6/272 (2%)

Query: 1   MTDLPSLRETLDAHGLSAKKSFGQHFLLDLNVTRKIVRLAGPFEGRAVIEVGPGPGGLTR 60
           +T LP LRE +  HGLSA K+ GQ+FL D  +  +I R+ G  EGR V EVGPGPGGLTR
Sbjct: 1   VTALPPLREVIRNHGLSASKALGQNFLFDSQLLDRIARVPGDLEGREVFEVGPGPGGLTR 60

Query: 61  ALLESDAGPVVLVEKDPRFIPLLTELDDG-SGRLTIVEADALKVKEADLVSGPTHLVSNL 119
           ALL++ A  V  VE+D R IP L EL +   G+LT++E DAL+V    L +G  H+ SNL
Sbjct: 61  ALLQAGA-KVTAVERDRRCIPALAELGEAFPGKLTVIEGDALEVDAPSLFAGKPHIASNL 119

Query: 120 PYNVGTPLLIKWLTGPWLPH--CLTLMFQKEVAERVAAGPGEDAYGRLAVIAQAVCTARI 177
           PYN+GT L + WL+  W P    LTLMFQKEVAER+ A PG  AYGRLAV+AQ   +A+I
Sbjct: 120 PYNIGTALTVGWLSAIWQPWWASLTLMFQKEVAERIVAAPGTGAYGRLAVLAQWRSSAKI 179

Query: 178 VMHLPAAAFTPPPKVASAVVHLVPLDERPSPERLKKLERVTAAAFGQRRKMLRSSLKQLG 237
            M +  +AFTPPPKV SAVVH+VP  E P+  +L  LE++T AAFGQRRKMLR SLK + 
Sbjct: 180 AMPVHRSAFTPPPKVMSAVVHIVP-GEEPAGVKLAVLEKLTGAAFGQRRKMLRQSLKAMP 238

Query: 238 GAA-LCEAAGIEPDARAETIDVAGFLRLADAL 268
           GA    E+ GI+P  RAET+ V  F+ LA  L
Sbjct: 239 GAVEAAESIGIDPTRRAETVSVDEFVALARTL 270