Pairwise Alignments

Query, 325 a.a., ketoacyl-ACP synthase III from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 335 a.a., 3-oxoacyl-[acyl-carrier-protein] synthase III (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  246 bits (629), Expect = 4e-70
 Identities = 130/329 (39%), Positives = 199/329 (60%), Gaps = 16/329 (4%)

Query: 1   MTVTRSAVTGVGSYLPDEIVTNADLAKFVDTSDEWIQERTGIKQRHKARDDQ-PTSDLAV 59
           M    + +TGVG Y+PD ++TN +++K VDT+DEWI  R GIK+RH   ++   TS +A 
Sbjct: 1   MDKINAVITGVGGYVPDYVLTNDEISKMVDTTDEWIMGRIGIKERHILNEEGLGTSYMAR 60

Query: 60  EAARKALADAGKAASDVDLIIVATTTPDMTFPAVASIVQAKLGAGVGIAFDVQAVCSGFV 119
           +AA++ +        D+DL+IVATTT D  FP+ ASI+  +LG     AFD+QAVCSGF+
Sbjct: 61  KAAKQLMQRTKSRPDDIDLVIVATTTSDYRFPSTASILCERLGLKNAFAFDMQAVCSGFL 120

Query: 120 YALSVADGFVARGLSKCALVIGAEEMTRLMDWTDRTTCVLFGDGAGAVVLEPREGQGTSD 179
           YA+     F+  G  K  +++GA++M+ ++D+TDR TC +FGDGA A +LEP     T++
Sbjct: 121 YAMETGANFIRSGKYKKIIIVGADKMSSVIDYTDRATCPIFGDGAAAFMLEP-----TTE 175

Query: 180 DQGMLGFALRADGSKTDLLYVDGG----PATTGTVGH----LRMAGNQVFRHAVVNIAEG 231
           + G++   LR DG     L++  G    P +  ++ H    +   G  VF++AV N+++ 
Sbjct: 176 EVGIMDSVLRTDGKGLPFLHIKAGGSVCPPSYYSLDHHLHYIYQEGRTVFKYAVANMSDS 235

Query: 232 ITAACAAANIQIADVDWFVPHQANQRIIKGVGDRLGLDENKVVSTVATHANTSAASIPLA 291
             A  A  ++   +VDW +PHQANQRII  V  RL +   KV+  +  + NTSA ++PL 
Sbjct: 236 CEAIIARNHLTKEEVDWVIPHQANQRIITAVAQRLEVPSEKVMVNIERYGNTSAGTLPLC 295

Query: 292 LDAAIQDGRIKKGDMVLLEAMGGGLTWGA 320
           +     + ++KKGD ++  A G G  WGA
Sbjct: 296 IWDF--EKKLKKGDNLIFTAFGAGFAWGA 322