Pairwise Alignments

Query, 421 a.a., efflux RND transporter periplasmic adaptor subunit from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 354 a.a., HlyD family secretion protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 5/186 (2%)

Query: 220 LARVESSESLQTYSVTAPISGVITTKNANPGQITGNGPPMLTIGDPTRLHAEFFLYPRDA 279
           LA+++  ES     + +P+ G+I  +    G +      +  + +   LH    L  +  
Sbjct: 150 LAKLQVKES----QIVSPVDGIIAKRFVKAGNMAKEFEELFYVVNQDELHGIVHLPEQQL 205

Query: 280 ERVRVGQRVELKSLAGEHTATGV-IEAILPSDDVLSQTLVAHVELPYQGGVWRPGLGVEG 338
             +R+GQ  ++ +   ++ A    +  I P  D  S T    +++P Q G+ + G+    
Sbjct: 206 SSLRLGQHADIYASGQKNQAVNAEVLRISPVVDAQSGTFKVTLKVPNQNGILKSGMFTRV 265

Query: 339 VVQVGAGEVPLAVKTKGLQPFRDFTVVYAKVGDTYEVRMLELGRRTDEWTEVLGGIEPGT 398
            ++    E  + V    +    +   +Y     T E R +ELG R     EV+ GI PG 
Sbjct: 266 ELKYDTHENVITVPYNAIINQDNKQTLYVVQDTTAERREVELGYREGNMVEVVAGIAPGE 325

Query: 399 TYVVDG 404
             V+ G
Sbjct: 326 HLVIRG 331



 Score = 30.0 bits (66), Expect = 1e-04
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 192 QAEVFARYPGRIVSLNVQLGQRVSRGQVLARVES 225
           +A V  R  G I +L+V+ G RV +GQ+LA +++
Sbjct: 63  EAHVVTRIAGLIEALHVEEGDRVKQGQLLAVIDA 96