Pairwise Alignments

Query, 421 a.a., efflux RND transporter periplasmic adaptor subunit from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 356 a.a., secretion protein HlyD (RefSeq) from Shewanella amazonensis SB2B

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 19/197 (9%)

Query: 220 LARVESS---ESLQTYSVTAPISGVITTKNANPGQITGNGPPMLTIGDPTRLHAEFFLYP 276
           LARV      ++L    + AP  G++ +++   G+  G   P+LTI DP  L        
Sbjct: 145 LARVRLDIIRDNLARTQLKAPFGGIVISRSHQAGEDVGPAEPVLTITDPDHLEIRLHAPL 204

Query: 277 RDAERVRVGQRVELKSLAGEHTATGVIEAILPSDDVLSQTLVAHVELPYQGGVWRPGLGV 336
           + + RV +G  +++    GE +A   I  ++P  DV SQT  A ++LP Q       +G 
Sbjct: 205 KHSRRVNIGDELKVYHSNGEFSAR--IRTLIPVSDVRSQTFEARLDLP-QAMAREINIG- 260

Query: 337 EGVVQVGAGEVPLAVKTKGLQPFRDFTVVYAKVGDTYEVR--------MLELGRRTDEWT 388
               ++ +  +P+A  T      RD  V+ +     + V          + LG     W 
Sbjct: 261 ----ELVSMALPIAPATLTTLVPRDALVLRSSGASVFRVTPEQTAERIPVTLGDGEGPWI 316

Query: 389 EVLGGIEPGTTYVVDGA 405
            V G +  G T V+ GA
Sbjct: 317 AVRGELNAGDTLVIRGA 333