Pairwise Alignments

Query, 421 a.a., efflux RND transporter periplasmic adaptor subunit from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 414 a.a., secretion protein HlyD (RefSeq) from Shewanella sp. ANA-3

 Score =  318 bits (815), Expect = 2e-91
 Identities = 185/411 (45%), Positives = 247/411 (60%), Gaps = 9/411 (2%)

Query: 16  SAFALA-LASCGGGAEKAAP--ESEAEAAAAADYERGPHNGRLLRDGDFALEVTIYEEGP 72
           S+ +LA L S G  A  + P   S A  A  A+ E+GPH GR+LR+GDFALE+ I+E G 
Sbjct: 8   SSLSLAILLSLGINAVASTPLMASSAPVAEQAEPEKGPHRGRMLREGDFALELAIFETGV 67

Query: 73  EPLFRLYPYVNDKPVDPRQVQVTMALTRLGPKVDRFIFAPENDYLASPGVVFEPHSFDVA 132
            P FR++     KP+DP+ V +++ LTRLG  VD   F  + D+L     ++EPHSF V 
Sbjct: 68  PPEFRVWTSFEGKPLDPKTVDLSVKLTRLGNVVDDIRFNAQGDFLRGDMEIYEPHSFIVT 127

Query: 133 VNAVRAGKRSNWTYQSYEGRTIISSQAAQAGGVTTERAGPAVLGETLPLSGRVEITPEGQ 192
           + A   GK   W Y ++EGRT I    A A  + +  AGPA L +T+P  G + +    Q
Sbjct: 128 IEAKYQGKTYRWQYDNFEGRTTIEQAVASAMEIHSGFAGPATLHQTIPAYGTLALPVGTQ 187

Query: 193 AEVFARYPGRIVSLNVQLGQRVSRGQVLARVESSESLQTYSVTAPISGVITTKNANPGQI 252
             + AR+ G I  L+V LG RV +GQ L  VES+ESL+ Y + AP  GV++   AN G+ 
Sbjct: 188 RAIAARFDGEITRLHVGLGDRVKKGQTLLTVESNESLKPYQIKAPSDGVVSALFANNGEQ 247

Query: 253 TGNGPPMLTIGDPTRLHAEFFLYPRDAERVRVGQRVELKSLAGEHTATGVIEAILPS--D 310
           T  G  +LT+ D +   A+  +YP D + V +G  V +     E T  G I  I P   D
Sbjct: 248 T-LGRQLLTLTDNSHYIAKLAVYPIDYQSVILGAPVTINVEGVEETYQGSISFIEPEVRD 306

Query: 311 DVLSQTLVAHVELPYQGGVWRPGLGVEGVVQVGAGEVPLAVKTKGLQPFRDFTVVYAKVG 370
           D   Q  +A V+L    GV   G  V   ++V   EVPLAVK  GLQ FRDFTVV+AKVG
Sbjct: 307 D---QARIAWVKLADPNGVLTAGSFVNASIEVATIEVPLAVKRVGLQGFRDFTVVFAKVG 363

Query: 371 DTYEVRMLELGRRTDEWTEVLGGIEPGTTYVVDGAFLIRADIDKSGASHDH 421
           + YEVRMLELGR+  EW EVLGG++PGT YV D +++++ADI+KSGASHDH
Sbjct: 364 EQYEVRMLELGRQDGEWVEVLGGLKPGTEYVTDNSYILKADIEKSGASHDH 414