Pairwise Alignments

Query, 792 a.a., penicillin-binding protein 1A from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 839 a.a., penicillin-binding protein 1A (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  405 bits (1041), Expect = e-117
 Identities = 271/788 (34%), Positives = 406/788 (51%), Gaps = 81/788 (10%)

Query: 1   MVLLGGIALAGL--VVAVYAAWLFHDLPDASELADYRPPTATRVYAGDGTLIGEFSDERR 58
           ++ L  +AL G+  +VA Y  ++  DLPD S L + +  T  R+Y+ DG LI +F ++RR
Sbjct: 8   VIALFSLALLGVGAIVAAYF-YVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQFGEKRR 66

Query: 59  IYVSYDQIPQPVIHAFLAAEDRNFFQHGGIDVGGIGRASLKNVFNLASGRRLEGGSTITQ 118
           I +  +++P+P++ AFLA ED  F++HGGID  G+ RA+      L +G + +G STIT 
Sbjct: 67  IPLKLEEVPKPLLQAFLATEDARFYEHGGIDPVGVMRAA---TVMLTTGEKKQGASTITM 123

Query: 119 QVAKNVLLTNESSLNRKLKEAILANRLEATLSKEQILELYLNEIFLGYRSFGIASAAYNY 178
           QVA+N  LT + ++ RK+KE  ++  +E  L+K++ILELY+N I+LG R++G+ +AA  Y
Sbjct: 124 QVARNFFLTRDKTIIRKVKEIFISYHIEQLLTKDEILELYVNRIYLGQRAYGVGAAAQVY 183

Query: 179 FGKSLAQLTPDEAAFLASLPKGPNNYHPKRHPGAAKGRRDWVLGEMEQSGWLTPEQLVEA 238
           FGK++  LT  E + +A LPK P+  +P   P  A  RR+ VL  M + G+++  +   A
Sbjct: 184 FGKNVQDLTLSEMSMIAGLPKAPSTLNPITSPSRALARRNVVLMRMNEVGYISKAEYQAA 243

Query: 239 RAKPLVTRDAPQRSDYKDADFFVEEARRQAAANPQFGEQLRAGGFYMRTTLDPTLQTAAR 298
             +PLV +      D      ++ E  R         E+    G+ + TT+   LQ  A+
Sbjct: 244 LQEPLVAKYHGAEIDLYAP--YISEMARDYMVQKYGEEEAYTNGYNVYTTISSDLQLLAQ 301

Query: 299 RALMQGLENYDRRHGWRGG----WGTTDFADGWQAVALKEQAPPERRSWQAAAIESVSGN 354
           +AL   +  YD RHG+RG     W T    D  Q  A   +  P +   Q AA+ SV G 
Sbjct: 302 QALRNNVYAYDERHGYRGPAAALW-TGAKPDNAQIQAELAKVTPVQEL-QPAAVLSVEGQ 359

Query: 355 TVRIRTARDDKSGTLLASDAAWA--------------NANRQLKRGELIFVEPQGGQFAL 400
              + TA+ +    +      WA              +A+  L  GE I++   G    L
Sbjct: 360 QASVLTAKGETK-VIKWDGLKWARKFINDKRQGAVPKSASEILTVGERIWIRDNGQHLQL 418

Query: 401 KQVPRVNGALVAIEPQSGRVLAMVGGYSYALSSFNRATQARRQPGSAFKPFVYATALEGD 460
            QVP V  A V+++P++G +  +VGGYS++ S +NR TQA+RQ GS  KPF+YA ALE  
Sbjct: 419 SQVPEVASATVSLDPENGAIRTLVGGYSFSQSQYNRVTQAKRQLGSNIKPFIYAAALEKG 478

Query: 461 FTPASIVLDAPISFAGGPNGQRWTPENYSRQYYGPQTLRRGLELSRNVMTVRLAQSVGMK 520
           FT A+++ +API+      G  W P+N    Y GP  LR GL  S NVM+VR  + +G+ 
Sbjct: 479 FTLATLINNAPINKPDISQGTAWRPKNSPDIYGGPTRLRVGLAQSINVMSVRAMRHIGLD 538

Query: 521 KIVDQSAKMGL-PGMTP-NLSVSLGAGEVTPLEITAAYSAFANGGRRVTPYLIDYVQDRD 578
             + +  K G  P   P N S++LG+  VTPL++  A++ FANGG  V P+ I+ V+D  
Sbjct: 539 AAIAELTKFGFDPNDLPRNESLALGSPSVTPLQVATAFNVFANGGFLVEPFYIERVEDSF 598

Query: 579 GETIFRAD-NRSCRECGRGFSGQESPR----------------LQQRG---TQVIDPITA 618
           G  I +A+   +C+           P                  +Q G    Q+I   TA
Sbjct: 599 GNVIEKANPTLACKSNNSHVQPSSDPMSFGEPTAQTDAAVAHCFEQTGRYAPQIISEQTA 658

Query: 619 YQMSSMLEGVVQRGTAASARGLG----PW----------VAGKTGTTNEYRSAWFVGFTT 664
           + ++  L+ V+  G   S +G G     W          +AGKTGTTNE R  WF GF  
Sbjct: 659 FLITEALKSVIWGGGDWS-KGTGWQGTAWRAAQLIKRHDIAGKTGTTNESRDTWFSGFGP 717

Query: 665 DIVVGVFIGFDDN-RSLG--------------SGEAGASAAVPVFTEFMQTALKERPARP 709
            +    ++GFDD+ R LG                EAGA  A P + EFM   LK  P   
Sbjct: 718 TLTSTFWVGFDDHGRQLGRTAWNANGEKDQITGTEAGAKTAGPGWNEFMNNVLKGVPETT 777

Query: 710 FVRPKNAI 717
            + P+  +
Sbjct: 778 AIPPEGIV 785