Pairwise Alignments

Query, 456 a.a., DNA repair protein RadA from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 454 a.a., DNA repair protein RadA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  379 bits (974), Expect = e-110
 Identities = 199/455 (43%), Positives = 281/455 (61%), Gaps = 5/455 (1%)

Query: 1   MARDSALYVCQSCGSVHSKWSGQCGSCGQWNTLSEESRSAPPGAIKPSAAASARTRGIQF 60
           MA++   YVC  CG    +W GQC +C +WNT++E    A         A  A     + 
Sbjct: 1   MAKNKTAYVCNECGQDFPRWQGQCSACHEWNTITEVRLGAASPGRGTKFAGYAGAGSSEV 60

Query: 61  ETL-QSDTPEPPRITTGVAEFDRVCGGGVVPGSAILLSGDPGVGKSTLLLEVAAKAALRG 119
           +TL Q D    PRI +   E DRV GGG+VPGSAIL+ G PG GKSTLLL+     A + 
Sbjct: 61  KTLDQIDLNALPRIVSHFGELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCHLAEQM 120

Query: 120 SRVAYISGEEAVEQIRARAKRMGLADAPVNLAAATALREILGTLKREQFDIVIVDSIQTL 179
             + Y++GEE+++Q+  RA R+GL    + + + T++ +I     +E   +++VDSIQ +
Sbjct: 121 PAL-YVTGEESLQQVAMRAHRLGLPTNKLRMLSETSVEQICEIALQESPKVIVVDSIQVM 179

Query: 180 WSDVHESGPGSITQVRACAGEMVRLAKSQGVAVVLVGHVTKDGQVAGPRVVEHLVDAVMT 239
                 S PGS++QVR  A  + R AK  G+AV++VGHVTKDG +AGP+V+EH +D  + 
Sbjct: 180 HMSDVASSPGSVSQVRESASYLTRFAKQHGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVM 239

Query: 240 FEGERGYPFRILRAGKNRFGATDEIGVFEMGDAGLREVANPSALFLGEGKERAPGAAVFA 299
           FEG+    +R LR+ KNRFGA +E+GVF M + GL+EVANPSA+FL  G+E + G+ V  
Sbjct: 240 FEGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEESSGSLVMV 299

Query: 300 GIEGSRPVLVEMQALVSKSAYGTPRRAVIGWETGRLAMVLAVLEARCGFGFGDQDVYLNV 359
             EG+RP+LVE+Q LV  SA   PRR  +G +  RLAM+LAV+    G    DQDV++NV
Sbjct: 300 VWEGTRPLLVELQVLVDNSAMSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVNV 359

Query: 360 AGGLRINEPAADLAAAAALISSATGVSLPQGCVVFGEIGLSGEVRSVGRAEARLREAQKL 419
            GG+++ E +ADL    A++SS  G  LP   VVFGE+GLSGE+R V   + RL EA K 
Sbjct: 360 VGGVKVTETSADLTLLLAMVSSFRGDILPSDLVVFGEVGLSGEIRPVPNGQERLVEAAKH 419

Query: 420 GFDQVLSPTLTAKTK---GVKVTSVTRLTDVVERI 451
           GF + + P      K   G++V  V++L++ +E I
Sbjct: 420 GFKRAIVPRANVPKKPPVGMEVVGVSKLSEALEAI 454