Pairwise Alignments

Query, 271 a.a., carbohydrate ABC transporter permease from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 320 a.a., putative ABC transporter permease protein from Phaeobacter inhibens DSM 17395

 Score =  156 bits (395), Expect = 5e-43
 Identities = 82/224 (36%), Positives = 130/224 (58%), Gaps = 10/224 (4%)

Query: 53  HYRDLFLNQGMGRYLWNSFALATLATILALGFTVPAGYAFAKLKFAGRERLFQFLVAALV 112
           +Y   F    + RYL N   +     ++ +   +PA YA AKLKF GRE +F  ++  L+
Sbjct: 101 NYSKAFTEAPLLRYLLNGIIVTGSIFLIQVVVALPAAYALAKLKFWGREAVFGLVLFCLL 160

Query: 113 VPAQIGTLPLFLMLKSMELVNTYAGALVPWLASIFGLFLVRQYALSIPEEMLEAARIDGA 172
           +P     LPL++ML  + L NTYA  +VPW  S+FG+FL+RQ+ +++P+++++AAR+DG 
Sbjct: 161 IPVHAIALPLYIMLAKLGLTNTYAALVVPWTISVFGIFLMRQFFMTVPDDLIDAARMDGM 220

Query: 173 SEGQIFRRVVLPTLQPIIVTLGLFVFLGSWNDFLWPLIILT-DQSNYTLPVALAALSREH 231
            E  I  RV+LPT  P ++   +F  +  WND+ WP I++T ++  +T P+ L    RE 
Sbjct: 221 GEFSIVWRVMLPTAIPALLAFAIFSIVAHWNDYFWPRIVVTGNRDLFTPPLGL----REF 276

Query: 232 VQD-----IELMMAGAVVTVAPVLILFLSLQRYYIRGMLAGSVK 270
             D        MMA A V V P+++ FL  Q+ +I G+    +K
Sbjct: 277 KGDGDGSYFGPMMATATVIVTPLIVAFLLAQKRFIEGITLSGMK 320



 Score = 23.5 bits (49), Expect = 0.006
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 9  NLAVGLIAIIVLFPLVWMVSVSFMATGE 36
          +L + L  I+V+ P   MVS SF + GE
Sbjct: 8  HLILILGVIVVIAPFYMMVSYSFKSPGE 35