Pairwise Alignments

Query, 565 a.a., DNA repair protein RecN from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 550 a.a., SMC domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  226 bits (576), Expect = 2e-63
 Identities = 189/578 (32%), Positives = 263/578 (45%), Gaps = 43/578 (7%)

Query: 1   MLTALSIRDVVLVDVLDLEVENGLTVLTGETGAGKSIILDALGLALGGRGDAGLVRNGAK 60
           ML  L IRD+ L++ ++L+   GL  LTGETGAGKS IL AL   +G R  + +VR G +
Sbjct: 1   MLEYLRIRDLALIEDMELDFAPGLNALTGETGAGKSFILKALNFLIGDRLTSDMVRPGKE 60

Query: 61  QAVATAVFSAPDDPDLLALIADKGFEVQPGEELILRRVLGAD-GRSRAYVNDQPAGVTAV 119
           +A   A+F+ PD                   +++LRR L AD GRSR ++ND+ +   AV
Sbjct: 61  KAHVEALFALPDG------------------DMVLRRELTADTGRSRLFINDRLSSQDAV 102

Query: 120 REIGAALVEVHGQHETVGLLDWRTHRASLDAYGGLQPQLSAVASASAKLKAAEAKLAELK 179
           R++ A+LV    QH    LL        LD +      L+A   A   L+   A+  EL 
Sbjct: 103 RDMRASLVVHTSQHGQQKLLQPAFQARLLDEFLNRPDLLAARDDALKGLREVAARREELA 162

Query: 180 AQAADADARREEISLNLSELDALDPRADEETELAGERALLG-------AAEKAIADLGDA 232
           A+A   + RR+ +     E+D + P A EE  L   R  L        A E+A+A L   
Sbjct: 163 ARARSLEDRRDVLEFQQREIDKVAPEAGEEERLEERRRALRDVASAQQAQERALAVLRGE 222

Query: 233 RTQLGGDKLSQKLGAALRAVE-----HARQRAGQAGAEGDHPVIVKLSAAVEAIDRTMVE 287
                G  +++ LG   R ++     H       A   GD          + A  + + +
Sbjct: 223 ----DGPGVAEALGLLERTLDGLARLHGADSGDAAPGSGDASGWAADVTTISAFRQGLSD 278

Query: 288 AAEALAAVDAAADAFDYEPGRLDKAEERLFALRAAARKLHTTVDALPTLRIRLREQLRLI 347
               L    A A +   +   ++  E+RL+ L    RKL  T+D +  LR  + E L  +
Sbjct: 279 LERRLRRRPAPAASDGDDDMDVEAIEKRLYELAQLKRKLRRTLDEIVDLRREIEENLSFL 338

Query: 348 EDGEEALTNAGREAAEAAEAYDLAATFLTSAREAAAERLTAAVMGELGPLKLERARFRVA 407
           +     L    RE     E        L  AR+ AA RL  A+ GEL  L       RV 
Sbjct: 339 DACRLDLRTLEREEEARKEQLCAVLAELNPARQEAATRLAQALEGELAGLGFSE-HVRVT 397

Query: 408 LEPIEGRRGPDGVET-VRFQIATNAGTDFGPLDAIASGGELARFALAMKAALASREDMRQ 466
            +       P  VE   R     N G    PLD IASGGEL+RF LA+   +A  E    
Sbjct: 398 FDFTPHEPWPGCVEDRARLMWVPNPGQPPQPLDRIASGGELSRFLLAVVGLMARDETA-- 455

Query: 467 PVMIFDEVDQGVGGAVAEAVGSRLKRLSNGAQVLVVTHSPQVAARGHAHWKVMKADRDGL 526
             +IFDEVD GVGG     V  RL  L+   QV+++TH PQ+AAR   H++V K   D  
Sbjct: 456 -TLIFDEVDSGVGGLTLNRVSERLAALAGRRQVILITHWPQLAARAGRHFQVSKEVADNA 514

Query: 527 TTTTVVALDDQRRQEEIARMLSGAEITDEARAAARALI 564
           T T    LD +  ++E+ARM  G     +  A AR LI
Sbjct: 515 TFTLCRRLDGEDIRKELARMAGGG---GQGEAMARELI 549