Pairwise Alignments

Query, 565 a.a., DNA repair protein RecN from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 552 a.a., recombination and repair protein (RefSeq) from Shewanella sp. ANA-3

 Score =  284 bits (726), Expect = 7e-81
 Identities = 183/564 (32%), Positives = 278/564 (49%), Gaps = 13/564 (2%)

Query: 1   MLTALSIRDVVLVDVLDLEVENGLTVLTGETGAGKSIILDALGLALGGRGDAGLVRNGAK 60
           ML  LSI +  +V  L+L+   G+T +TGETGAGKSI +DALGL LG R DA  VR GA 
Sbjct: 1   MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGAS 60

Query: 61  QAVATAVFSAPDDPDLLALIADKGFEVQPGEELILRRVLGADGRSRAYVNDQPAGVTAVR 120
           +   +A FS  D P     + D   E+   +E ILRR +G+DGRSRAY+N  P  +T ++
Sbjct: 61  KTEVSARFSLEDVPLAKRWLEDNDLELD--DECILRRTIGSDGRSRAYINGNPVPLTQLK 118

Query: 121 EIGAALVEVHGQHETVGLLDWRTHRASLDAYGGLQPQLSAVASASAKLKAAEAKLAELKA 180
            +G  LV +HGQH    +L        LD+Y   +  +  VA++  + K  EA+L +L+A
Sbjct: 119 LLGQLLVGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVAASYQRCKQIEAELKQLEA 178

Query: 181 QAADADARREEISLNLSELDALDPRADEETELAGERALLGAAEKAIADLGDARTQLGGDK 240
              +  AR++ +   + ELD  D +  E  E+  E   L    + +     +   L   +
Sbjct: 179 SQQERIARKQLVQYQVEELDEFDLKVGEFEEIEQEHKRLANGTELVDSCQASLFLLTDGE 238

Query: 241 LSQKLGAALRAVEHARQRAGQAGAEGDHPVIVKLSAAVEAIDRTMVEAAEALAAVDAAAD 300
            S       +AV  A         +   P +  +S     ++  +++  E+   +     
Sbjct: 239 ESNIESLLNKAVGLAEN------LQSYDPALTNVSTM---LNEALIQVQESAGELQHYLS 289

Query: 301 AFDYEPGRLDKAEERLFALRAAARKLHTTVDALPTLRIRLREQLRLIEDGEEALTNAGRE 360
             + +P      EERL      ARK H + D L    + L+ +L  ++D E  L +  R+
Sbjct: 290 KLELDPAHFAYLEERLSKAMQLARKHHVSPDKLAEHHLALKSELTTLDDDENKLEDIQRQ 349

Query: 361 AAEAAEAYDLAATFLTSAREAAAERLTAAVMGELGPLKLERARFRVALEPIEGRRGPDGV 420
              +  AY   A  L+ +R   A+ L   V   +  L + + +F + +         +G 
Sbjct: 350 VEASKVAYLANAQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFNPEIISMNGS 409

Query: 421 ETVRFQIATNAGTDFGPLDAIASGGELARFALAMKAALASREDMRQPVMIFDEVDQGVGG 480
           + + F + TN G    P+  +ASGGEL+R  L ++   A +  +  P +IFDEVD G+ G
Sbjct: 410 DNIEFMVTTNPGQPLQPISRVASGGELSRIGLGIQVITAKK--VATPTLIFDEVDVGISG 467

Query: 481 AVAEAVGSRLKRLSNGAQVLVVTHSPQVAARGHAHWKVMKADRDGLTTTTVVALDDQRRQ 540
             A  VG  L+ L    QVL VTH PQVA  GH H  V K ++ G T TT+  LD ++R 
Sbjct: 468 PTAAVVGRMLRSLGESTQVLCVTHLPQVAGNGHQHMFVNKFNKAGSTETTMTPLDREQRI 527

Query: 541 EEIARMLSGAEITDEARAAARALI 564
           +E+AR+L G  IT    A AR L+
Sbjct: 528 QELARLLGGDTITTNTLANARELL 551