Pairwise Alignments

Query, 252 a.a., TrbI/VirB10 family protein from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 409 a.a., Type IV secretory pathway, VirB10 components from Sphingomonas koreensis DSMZ 15582

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 85/256 (33%), Positives = 120/256 (46%), Gaps = 27/256 (10%)

Query: 2   PSPQGAVATNGGGGSTASALVIDTMRGPQRGEDLERAEGQNVQSTGQNASGQGVVVRAAA 61
           P P G        G   + + +D  R P          GQ  ++      G    +   A
Sbjct: 168 PMPAGPTPGPPRSGEQIAKVAVDAERDPN---------GQERKADFIRTPGNAADINPHA 218

Query: 62  AQSGRLRLPASTVAQGSVIPAVLETAIDSTQPGPVRAVVSRDVRGFD---GTRVLIPRGS 118
                 R    T++ GSVI A L T + S  PG V A V+  V  FD   G  +L+P+G+
Sbjct: 219 VTP---RPSPFTLSTGSVISASLITGLRSDLPGLVTAQVTERV--FDSATGNILLVPQGA 273

Query: 119 RLFGAYQTDLSPGQSRALVEWTRLVRPDGVTIAL-SSPAGDLQGRSGVRGRVDNHFLQRF 177
           RL GAY   ++ GQ RALV W R++ PDG +I L ++PA D  G +G+  +VD H     
Sbjct: 274 RLIGAYDNVVAFGQWRALVVWQRIIFPDGSSIRLDNAPATDPSGYAGLADKVDFHTWALL 333

Query: 178 GAALLRTTLDVGAAVAGRSLSRDAGVIIALPGSTQTS----GSGNTARG--IQPTLRVEA 231
              +L T L VG+ +     S ++ ++ A+  STQ S    G   T+R   IQPT+ +  
Sbjct: 334 KGVVLSTLLGVGSEL---QFSGESDLVQAVRQSTQQSVSRAGDQLTSRNLQIQPTITIRP 390

Query: 232 GARVTALVSRDLEFIP 247
           GA V  LV  DL   P
Sbjct: 391 GAPVRLLVHHDLILKP 406



 Score = 23.5 bits (49), Expect = 0.007
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 43  VQSTGQNASGQGVVVRAAAAQSGRLRLPASTVAQGSVIPAVLETAIDSTQPGPVRA 98
           V  T  +A  +      AA +SG L   A   AQG  +PA          PGP R+
Sbjct: 132 VPQTADDARQRRAAELKAARESGLLIQTAGQQAQGGPMPA-------GPTPGPPRS 180